Literature DB >> 12075029

BAOBAB: a Java editor for large phylogenetic trees.

J Dutheil1, N Galtier.   

Abstract

SUMMARY: BAOBAB is a Java user interface dedicated to viewing and editing large phylogenetic trees. Original features include: (i) a colour-mediated overview of magnified subtrees; (ii) copy/cut/paste of (sub)trees within or between windows; (iii) compressing/ uncompressing subtrees; and (iv) managing sequence files together with tree files. AVAILABILITY: http://www.univ-montp2.fr/~genetix/.

Entities:  

Mesh:

Year:  2002        PMID: 12075029     DOI: 10.1093/bioinformatics/18.6.892

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  4 in total

1.  A reference guide for tree analysis and visualization.

Authors:  Georgios A Pavlopoulos; Theodoros G Soldatos; Adriano Barbosa-Silva; Reinhard Schneider
Journal:  BioData Min       Date:  2010-02-22       Impact factor: 2.522

2.  Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon.

Authors:  John P Vogel; Metin Tuna; Hikmet Budak; Naxin Huo; Yong Q Gu; Michael A Steinwand
Journal:  BMC Plant Biol       Date:  2009-07-13       Impact factor: 4.215

3.  MixtureTree annotator: a program for automatic colorization and visual annotation of MixtureTree.

Authors:  Shu-Chuan Chen; Aaron Ogata
Journal:  PLoS One       Date:  2015-03-31       Impact factor: 3.240

4.  Taxonomic distribution of large DNA viruses in the sea.

Authors:  Adam Monier; Jean-Michel Claverie; Hiroyuki Ogata
Journal:  Genome Biol       Date:  2008-07-03       Impact factor: 13.583

  4 in total

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