Literature DB >> 12073100

Temperature sensitivity of RNA editing and intron splicing reactions in the plastid ndhB transcript.

Daniel Karcher1, Ralph Bock.   

Abstract

Primary transcripts in higher plant cell organelles undergo a series of essential RNA processing steps, including 5'- and 3'-terminal maturation, intron splicing and RNA editing. Most of the protein factors involved in these RNA processing mechanisms are still unknown. Also, little is known about the environmental and developmental factors regulating RNA processing events in plastids. Here we have tested the influence of the environmental factor temperature on RNA processing in the ndhB mRNA from tobacco plastids. We find that, whereas temperature increase to 37 degrees C fully inhibits RNA editing at only one out of nine sites in the tobacco ndhB transcript, further temperature increase to 42 degrees C selectively blocks editing at two additional sites. As these temperature effects are strictly site-specific, our findings provide evidence for the existence of site-specific editing factors which exhibit differential temperature sensitivity. Furthermore, splicing of the group II intron present in the ndhB pre-mRNA is largely blocked at 42 degrees C, suggesting that chloroplast RNA processing steps are more sensitive to high temperature than chloroplast transcription. Our findings may also suggest that impaired plastid RNA processing contributes to the loss of chloroplast function upon plant growth at high temperature.

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Year:  2002        PMID: 12073100     DOI: 10.1007/s00294-002-0278-y

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  22 in total

1.  Developmental co-variation of RNA editing extent of plastid editing sites exhibiting similar cis-elements.

Authors:  Anne-Laure Chateigner-Boutin; Maureen R Hanson
Journal:  Nucleic Acids Res       Date:  2003-05-15       Impact factor: 16.971

2.  Increased accumulation of intron-containing transcripts in rice mitochondria caused by low temperature: is cold-sensitive RNA editing implicated?

Authors:  Shiho Kurihara-Yonemoto; Tomohiko Kubo
Journal:  Curr Genet       Date:  2010-09-28       Impact factor: 3.886

3.  Differential regulation of Arabidopsis plastid gene expression and RNA editing in non-photosynthetic tissues.

Authors:  Ching-Chih Tseng; Chih-Jen Lee; Yi-Ting Chung; Tzu-Ying Sung; Ming-Hsiun Hsieh
Journal:  Plant Mol Biol       Date:  2013-05-06       Impact factor: 4.076

4.  Structural features and transcript-editing analysis of sugarcane (Saccharum officinarum L.) chloroplast genome.

Authors:  Tercilio Calsa Júnior; Dirce Maria Carraro; Matheus Romanos Benatti; Alexandre Corrêa Barbosa; João Paulo Kitajima; Helaine Carrer
Journal:  Curr Genet       Date:  2004-11-04       Impact factor: 3.886

5.  Comprehensive analysis of plastid gene expression during fruit development and ripening of kiwifruit.

Authors:  Qiqi Chen; Pan Shen; Ralph Bock; Shengchun Li; Jiang Zhang
Journal:  Plant Cell Rep       Date:  2022-02-28       Impact factor: 4.570

6.  Cloning and sequence analysis of a low temperature-induced gene from trifoliate orange with unusual pre-mRNA processing.

Authors:  Y Jia; H S del Rio; A L Robbins; E S Louzada
Journal:  Plant Cell Rep       Date:  2004-05-12       Impact factor: 4.570

7.  A cytoplasmically inherited barley mutant is defective in photosystem I assembly due to a temperature-sensitive defect in ycf3 splicing.

Authors:  Alejandra Mabel Landau; Heiko Lokstein; Henrik Vibe Scheller; Verónica Lainez; Sara Maldonado; Alberto Raúl Prina
Journal:  Plant Physiol       Date:  2009-10-07       Impact factor: 8.340

Review 8.  GUN control in retrograde signaling: How GENOMES UNCOUPLED proteins adjust nuclear gene expression to plastid biogenesis.

Authors:  Guo-Zhang Wu; Ralph Bock
Journal:  Plant Cell       Date:  2021-05-05       Impact factor: 11.277

9.  Elimination of a group II intron from a plastid gene causes a mutant phenotype.

Authors:  Kerstin Petersen; Mark A Schöttler; Daniel Karcher; Wolfram Thiele; Ralph Bock
Journal:  Nucleic Acids Res       Date:  2011-02-26       Impact factor: 16.971

10.  Post-transcriptional control of chloroplast gene expression.

Authors:  Eva M del Campo
Journal:  Gene Regul Syst Bio       Date:  2009-03-12
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