Distribution of the pea pathogenicity ( PEP) genes in the fungus Nectria haematococca mating population VI.

Previous studies identified a cluster of six genes that are expressed in the fungus Nectria haematococca mating population VI during infection of pea. Four of these genes were shown to contribute to pathogenicity on pea and were called PEP genes for pea pathogenicity. The cluster is located on a "conditionally dispensable" (CD) chromosome and has features similar to bacterial pathogenicity islands. In this study, the occurrence and location of members of the PEP cluster were analyzed in laboratory strains and nine pea pathogenic and 16 non-pea pathogenic field isolates of N. haematococca. Our results indicate that all pea-pathogenic isolates have homologues for all six genes present in the PEP cluster and the homologues appear to be clustered. PEP homologues are also present in isolates that are not pathogenic on pea, although none of these isolates have homologues of all six genes. In addition, PEP homologues are found in CD chromosomes and in other chromosomes. Isolates without PEP homologues are virulent on ripe tomato fruits and carrot roots, indicating that PEP genes are not required for pathogenicity on these hosts.