Literature DB >> 12062966

Towards quantitative assays with peptide chips: a surface engineering approach.

Benjamin T Houseman1, Milan Mrksich.   

Abstract

The development of peptide and protein microarrays has created enormous opportunities in biomedical research. Current chip-based assays are well suited for identifying candidate protein or enzyme activities but still require conventional solution phase experiments to validate hits. Here, three surface-engineering strategies for microarray design are described and are illustrated in the development of a peptide chip for the quantitative analysis of kinase activity on solid support. These strategies promise to widen the application of microarrays by permitting the evaluation of hits in a chip-based format.

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Year:  2002        PMID: 12062966     DOI: 10.1016/s0167-7799(02)01984-4

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  10 in total

1.  All-atom molecular dynamics study of EAK16 peptide: the effect of pH on single-chain conformation, dimerization and self-assembly behavior.

Authors:  Soheila Emamyari; Hossein Fazli
Journal:  Eur Biophys J       Date:  2014-03-13       Impact factor: 1.733

2.  Click Chemistry with Cyclopentadiene.

Authors:  Brian J Levandowski; Ronald T Raines
Journal:  Chem Rev       Date:  2021-03-02       Impact factor: 60.622

3.  Determination of kinetic parameters for interfacial enzymatic reactions on self-assembled monolayers.

Authors:  Satish Nayak; Woon-Seok Yeo; Milan Mrksich
Journal:  Langmuir       Date:  2007-04-03       Impact factor: 3.882

4.  A multiplexed device based on tunable nanoshearing for specific detection of multiple protein biomarkers in serum.

Authors:  Ramanathan Vaidyanathan; Lara Michelle van Leeuwen; Sakandar Rauf; Muhammad J A Shiddiky; Matt Trau
Journal:  Sci Rep       Date:  2015-05-15       Impact factor: 4.379

5.  PIIKA 2: an expanded, web-based platform for analysis of kinome microarray data.

Authors:  Brett Trost; Jason Kindrachuk; Pekka Määttänen; Scott Napper; Anthony Kusalik
Journal:  PLoS One       Date:  2013-11-29       Impact factor: 3.240

6.  High-throughput mapping of CoA metabolites by SAMDI-MS to optimize the cell-free biosynthesis of HMG-CoA.

Authors:  Patrick T O'Kane; Quentin M Dudley; Aislinn K McMillan; Michael C Jewett; Milan Mrksich
Journal:  Sci Adv       Date:  2019-06-05       Impact factor: 14.136

7.  KRSA: An R package and R Shiny web application for an end-to-end upstream kinase analysis of kinome array data.

Authors:  Erica A K DePasquale; Khaled Alganem; Eduard Bentea; Nawshaba Nawreen; Jennifer L McGuire; Tushar Tomar; Faris Naji; Riet Hilhorst; Jaroslaw Meller; Robert E McCullumsmith
Journal:  PLoS One       Date:  2021-12-17       Impact factor: 3.240

8.  Profiling the selectivity of DNA ligases in an array format with mass spectrometry.

Authors:  Joohoon Kim; Milan Mrksich
Journal:  Nucleic Acids Res       Date:  2009-10-23       Impact factor: 16.971

9.  The activity of HDAC8 depends on local and distal sequences of its peptide substrates.

Authors:  Zachary A Gurard-Levin; Milan Mrksich
Journal:  Biochemistry       Date:  2008-05-10       Impact factor: 3.162

10.  Molecular nanoshearing: an innovative approach to shear off molecules with AC-induced nanoscopic fluid flow.

Authors:  Muhammad J A Shiddiky; Ramanathan Vaidyanathan; Sakandar Rauf; Zhikai Tay; Matt Trau
Journal:  Sci Rep       Date:  2014-01-16       Impact factor: 4.379

  10 in total

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