Literature DB >> 12059475

Ab initio molecular dynamics for molecules with variable numbers of electrons.

Ivano Tavernelli1, Rodolphe Vuilleumier, Michiel Sprik.   

Abstract

The ab initio molecular dynamics method is extended to treat exchange of electrons between molecules and a reservoir at fixed chemical potential. The method is based on a rigorously grand-canonical density functional approach using separate potential energy surfaces for each oxidation state. It is shown that the resulting discontinuous dependency of excess charge on chemical potential is consistent with the statistical thermodynamics of equilibrium gas-phase reactions. The method is illustrated by an application to the adiabatic redox dynamics of an aniline molecule.

Entities:  

Year:  2002        PMID: 12059475     DOI: 10.1103/PhysRevLett.88.213002

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  Role of protein frame and solvent for the redox properties of azurin from Pseudomonas aeruginosa.

Authors:  Michele Cascella; Alessandra Magistrato; Ivano Tavernelli; Paolo Carloni; Ursula Rothlisberger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-18       Impact factor: 11.205

2.  Calculating solution redox free energies with ab initio quantum mechanical/molecular mechanical minimum free energy path method.

Authors:  Xiancheng Zeng; Hao Hu; Xiangqian Hu; Weitao Yang
Journal:  J Chem Phys       Date:  2009-04-28       Impact factor: 3.488

3.  Combined quantum mechanical and molecular mechanical simulations of one- and two-electron reduction potentials of flavin cofactor in water, medium-chain acyl-CoA dehydrogenase, and cholesterol oxidase.

Authors:  Sudeep Bhattacharyya; Marian T Stankovich; Donald G Truhlar; Jiali Gao
Journal:  J Phys Chem A       Date:  2007-06-14       Impact factor: 2.781

4.  Ab initio quantum mechanical/molecular mechanical simulation of electron transfer process: fractional electron approach.

Authors:  Xiancheng Zeng; Hao Hu; Xiangqian Hu; Aron J Cohen; Weitao Yang
Journal:  J Chem Phys       Date:  2008-03-28       Impact factor: 3.488

5.  One-Electron Reduction Potentials: Calibration of Theoretical Protocols for Morita⁻Baylis⁻Hillman Nitroaromatic Compounds in Aprotic Media.

Authors:  Amauri Francisco da Silva; Antonio João da Silva Filho; Mário L A A Vasconcellos; Otávio Luís de Santana
Journal:  Molecules       Date:  2018-08-24       Impact factor: 4.411

  5 in total

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