Literature DB >> 12058347

Heterozygous submicroscopic inversions involving olfactory receptor-gene clusters mediate the recurrent t(4;8)(p16;p23) translocation.

Sabrina Giglio1, Vladimiro Calvari, Giuliana Gregato, Giorgio Gimelli, Silvia Camanini, Roberto Giorda, Angela Ragusa, Silvana Guerneri, Angelo Selicorni, Marcus Stumm, Holger Tonnies, Mario Ventura, Marcella Zollino, Giovanni Neri, John Barber, Dagmar Wieczorek, Mariano Rocchi, Orsetta Zuffardi.   

Abstract

The t(4;8)(p16;p23) translocation, in either the balanced form or the unbalanced form, has been reported several times. Taking into consideration the fact that this translocation may be undetected in routine cytogenetics, we find that it may be the most frequent translocation after t(11q;22q), which is the most common reciprocal translocation in humans. Case subjects with der(4) have the Wolf-Hirschhorn syndrome, whereas case subjects with der(8) show a milder spectrum of dysmorphic features. Two pairs of the many olfactory receptor (OR)-gene clusters are located close to each other, on both 4p16 and 8p23. Previously, we demonstrated that an inversion polymorphism of the OR region at 8p23 plays a crucial role in the generation of chromosomal imbalances through unusual meiotic exchanges. These findings prompted us to investigate whether OR-related inversion polymorphisms at 4p16 and 8p23 might also be involved in the origin of the t(4;8)(p16;p23) translocation. In seven case subjects (five of whom both represented de novo cases and were of maternal origin), including individuals with unbalanced and balanced translocations, we demonstrated that the breakpoints fell within the 4p and 8p OR-gene clusters. FISH experiments with appropriate bacterial-artificial-chromosome probes detected heterozygous submicroscopic inversions of both 4p and 8p regions in all the five mothers of the de novo case subjects. Heterozygous inversions on 4p16 and 8p23 were detected in 12.5% and 26% of control subjects, respectively, whereas 2.5% of them were scored as doubly heterozygous. These novel data emphasize the importance of segmental duplications and large-scale genomic polymorphisms in the evolution and pathology of the human genome.

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Year:  2002        PMID: 12058347      PMCID: PMC379160          DOI: 10.1086/341610

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  22 in total

1.  Recurrent Williams-Beuren syndrome in a sibship suggestive of maternal germ-line mosaicism.

Authors:  A Kara-Mostefa; O Raoul; S Lyonnet; J Amiel; A Munnich; M Vekemans; S Magnier; B Ossareh; J P Bonnefont
Journal:  Am J Hum Genet       Date:  1999-05       Impact factor: 11.025

2.  Alu-mediated PCR artifacts and the constitutional t(11;22) breakpoint.

Authors:  H Kurahashi; T H Shaikh; B S Emanuel
Journal:  Hum Mol Genet       Date:  2000-11-01       Impact factor: 6.150

Review 3.  Segmental duplications: an 'expanding' role in genomic instability and disease.

Authors:  B S Emanuel; T H Shaikh
Journal:  Nat Rev Genet       Date:  2001-10       Impact factor: 53.242

4.  Two further cases of WHS with unbalanced de novo translocation t(4;8) characterised by CGH and FISH.

Authors:  H Tönnies; M Stumm; L Neumann; M Volleth; U Grumpelt; J Müsebeck; G Annuss; H Neitzel
Journal:  J Med Genet       Date:  2001-06       Impact factor: 6.318

5.  Segmental duplications: organization and impact within the current human genome project assembly.

Authors:  J A Bailey; A M Yavor; H F Massa; B J Trask; E E Eichler
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

6.  Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements.

Authors:  S Giglio; K W Broman; N Matsumoto; V Calvari; G Gimelli; T Neumann; H Ohashi; L Voullaire; D Larizza; R Giorda; J L Weber; D H Ledbetter; O Zuffardi
Journal:  Am J Hum Genet       Date:  2001-02-26       Impact factor: 11.025

7.  Characterization of the NPHP1 locus: mutational mechanism involved in deletions in familial juvenile nephronophthisis.

Authors:  S Saunier; J Calado; F Benessy; F Silbermann; R Heilig; J Weissenbach; C Antignac
Journal:  Am J Hum Genet       Date:  2000-03       Impact factor: 11.025

8.  Unexpected high frequency of de novo unbalanced translocations in patients with Wolf-Hirschhorn syndrome (WHS).

Authors:  D Wieczorek; M Krause; F Majewski; B Albrecht; P Meinecke; O Riess; G Gillessen-Kaesbach
Journal:  J Med Genet       Date:  2000-10       Impact factor: 6.318

Review 9.  Epigenetic analysis of kinetochore assembly on variant human centromeres.

Authors:  P E Warburton
Journal:  Trends Genet       Date:  2001-05       Impact factor: 11.639

10.  Positive selection of a gene family during the emergence of humans and African apes.

Authors:  M E Johnson; L Viggiano; J A Bailey; M Abdul-Rauf; G Goodwin; M Rocchi; E E Eichler
Journal:  Nature       Date:  2001-10-04       Impact factor: 49.962

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  87 in total

Review 1.  Chromosomal translocations and palindromic AT-rich repeats.

Authors:  Takema Kato; Hiroki Kurahashi; Beverly S Emanuel
Journal:  Curr Opin Genet Dev       Date:  2012-03-06       Impact factor: 5.578

2.  Complex evolution of 7E olfactory receptor genes in segmental duplications.

Authors:  Tera Newman; Barbara J Trask
Journal:  Genome Res       Date:  2003-05       Impact factor: 9.043

3.  Influences of chromosome size, gene density and nuclear position on the frequency of constitutional translocations in the human population.

Authors:  Wendy A Bickmore; Peter Teague
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

4.  Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster.

Authors:  E J Hollox; J A L Armour; J C K Barber
Journal:  Am J Hum Genet       Date:  2003-08-12       Impact factor: 11.025

5.  Genome architecture catalyzes nonrecurrent chromosomal rearrangements.

Authors:  Paweł Stankiewicz; Christine J Shaw; Jason D Dapper; Keiko Wakui; Lisa G Shaffer; Marjorie Withers; Leah Elizondo; Sung-Sup Park; James R Lupski
Journal:  Am J Hum Genet       Date:  2003-03-20       Impact factor: 11.025

6.  Evolution of olfactory receptor genes in the human genome.

Authors:  Yoshihito Niimura; Masatoshi Nei
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-24       Impact factor: 11.205

7.  A palindrome-mediated recurrent translocation with 3:1 meiotic nondisjunction: the t(8;22)(q24.13;q11.21).

Authors:  Molly B Sheridan; Takema Kato; Chad Haldeman-Englert; G Reza Jalali; Jeff M Milunsky; Ying Zou; Ruediger Klaes; Georgio Gimelli; Stefania Gimelli; Robert M Gemmill; Harry A Drabkin; April M Hacker; Julia Brown; David Tomkins; Tamim H Shaikh; Hiroki Kurahashi; Elaine H Zackai; Beverly S Emanuel
Journal:  Am J Hum Genet       Date:  2010-07-30       Impact factor: 11.025

8.  Clinical utility gene card for: Wolf-Hirschhorn (4p-) syndrome.

Authors:  Agatino Battaglia; Sarah South; John C Carey
Journal:  Eur J Hum Genet       Date:  2010-12-08       Impact factor: 4.246

9.  Observation and prediction of recurrent human translocations mediated by NAHR between nonhomologous chromosomes.

Authors:  Zhishuo Ou; Paweł Stankiewicz; Zhilian Xia; Amy M Breman; Brian Dawson; Joanna Wiszniewska; Przemyslaw Szafranski; M Lance Cooper; Mitchell Rao; Lina Shao; Sarah T South; Karlene Coleman; Paul M Fernhoff; Marcel J Deray; Sally Rosengren; Elizabeth R Roeder; Victoria B Enciso; A Craig Chinault; Ankita Patel; Sung-Hae L Kang; Chad A Shaw; James R Lupski; Sau W Cheung
Journal:  Genome Res       Date:  2011-01       Impact factor: 9.043

Review 10.  The constitutional t(11;22): implications for a novel mechanism responsible for gross chromosomal rearrangements.

Authors:  H Kurahashi; H Inagaki; T Ohye; H Kogo; M Tsutsumi; T Kato; M Tong; B S Emanuel
Journal:  Clin Genet       Date:  2010-10       Impact factor: 4.438

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