Literature DB >> 12057198

Structure at 1.9 A resolution of a quinohemoprotein alcohol dehydrogenase from Pseudomonas putida HK5.

Zhi-wei Chen1, Kazunobu Matsushita, Tetsuo Yamashita, Taka-aki Fujii, Hirohide Toyama, Osao Adachi, Henry D Bellamy, F Scott Mathews.   

Abstract

The type II quinohemoprotein alcohol dehydrogenase of Pseudomonas putida is a periplasmic enzyme that oxidizes substrate alcohols to the aldehyde and transfers electrons first to pyrroloquinoline quinone (PQQ) and then to an internal heme group. The 1.9 A resolution crystal structure reveals that the enzyme contains a large N-terminal eight-stranded beta propeller domain (approximately 60 kDa) similar to methanol dehydrogenase and a small C-terminal c-type cytochrome domain (approximately 10 kDa) similar to the cytochrome subunit of p-cresol methylhydoxylase. The PQQ is bound near the axis of the propeller domain about 14 A from the heme. A molecule of acetone, the product of the oxidation of isopropanol present during crystallization, appears to be bound in the active site cavity.

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Year:  2002        PMID: 12057198     DOI: 10.1016/s0969-2126(02)00774-8

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  13 in total

1.  The electron transfer complex between nitrous oxide reductase and its electron donors.

Authors:  Simone Dell'acqua; Isabel Moura; José J G Moura; Sofia R Pauleta
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Review 2.  Bioinorganic insights of the PQQ-dependent alcohol dehydrogenases.

Authors:  Pedro D Sarmiento-Pavía; Martha E Sosa-Torres
Journal:  J Biol Inorg Chem       Date:  2021-02-19       Impact factor: 3.358

3.  Novel dehalogenase mechanism for 2,3-dichloro-1-propanol utilization in Pseudomonas putida strain MC4.

Authors:  Muhammad Irfan Arif; Ghufrana Samin; Jan G E van Leeuwen; Jantien Oppentocht; Dick B Janssen
Journal:  Appl Environ Microbiol       Date:  2012-06-29       Impact factor: 4.792

4.  Genomic analysis reveals widespread occurrence of new classes of copper nitrite reductases.

Authors:  Mark J Ellis; J Günter Grossmann; Robert R Eady; S Samar Hasnain
Journal:  J Biol Inorg Chem       Date:  2007-08-22       Impact factor: 3.358

5.  A novel pyrroloquinoline quinone-dependent 2-keto-D-glucose dehydrogenase from Pseudomonas aureofaciens.

Authors:  Kiwamu Umezawa; Kouta Takeda; Takuya Ishida; Naoki Sunagawa; Akiko Makabe; Kazuo Isobe; Keisuke Koba; Hiroyuki Ohno; Masahiro Samejima; Nobuhumi Nakamura; Kiyohiko Igarashi; Makoto Yoshida
Journal:  J Bacteriol       Date:  2015-02-02       Impact factor: 3.490

Review 6.  Determination of enzyme mechanisms by molecular dynamics: studies on quinoproteins, methanol dehydrogenase, and soluble glucose dehydrogenase.

Authors:  Swarnalatha Y Reddy; Thomas C Bruice
Journal:  Protein Sci       Date:  2004-08       Impact factor: 6.725

7.  X-ray structure of methanol dehydrogenase from Paracoccus denitrificans and molecular modeling of its interactions with cytochrome c-551i.

Authors:  Zong-Xiang Xia; Wei-Wen Dai; Yong-Ning He; Scott A White; F Scott Mathews; Victor L Davidson
Journal:  J Biol Inorg Chem       Date:  2003-09-23       Impact factor: 3.358

8.  Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenes. A versatile dehydrogenase oxidizing alcohols and carbohydrates.

Authors:  Henriëtte J Rozeboom; Shukun Yu; Rene Mikkelsen; Igor Nikolaev; Harm J Mulder; Bauke W Dijkstra
Journal:  Protein Sci       Date:  2015-10-20       Impact factor: 6.725

9.  An Extracellular Tetrathionate Hydrolase from the Thermoacidophilic Archaeon Acidianus Ambivalens with an Activity Optimum at pH 1.

Authors:  Jonas Protze; Fabian Müller; Karin Lauber; Bastian Naß; Reinhard Mentele; Friedrich Lottspeich; Arnulf Kletzin
Journal:  Front Microbiol       Date:  2011-04-25       Impact factor: 5.640

10.  Reaction mechanism of tetrathionate hydrolysis based on the crystal structure of tetrathionate hydrolase from Acidithiobacillus ferrooxidans.

Authors:  Tadayoshi Kanao; Naruki Hase; Hisayuki Nakayama; Kyoya Yoshida; Kazumi Nishiura; Megumi Kosaka; Kazuo Kamimura; Yu Hirano; Taro Tamada
Journal:  Protein Sci       Date:  2020-11-03       Impact factor: 6.993

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