Literature DB >> 12054897

Analysis of gene function in somatic mammalian cells using small interfering RNAs.

Sayda M Elbashir1, Jens Harborth, Klaus Weber, Thomas Tuschl.   

Abstract

RNA interference (RNAi) is a highly conserved gene silencing mechanism that uses double-stranded RNA (dsRNA) as a signal to trigger the degradation of homologous mRNA. The mediators of sequence-specific mRNA degradation are 21- to 23-nt small interfering RNAs (siRNAs) generated by ribonuclease III cleavage from longer dsRNAs. Twenty-one-nucleotide siRNA duplexes trigger specific gene silencing in mammalian somatic cells without activation of the unspecific interferon response. Here we provide a collection of protocols for siRNA-mediated knockdown of mammalian gene expression. Because of the robustness of the siRNA knockdown technology, genomewide analysis of human gene function in cultured cells has now become possible. (c) 2002 Elsevier Science (USA).

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Year:  2002        PMID: 12054897     DOI: 10.1016/S1046-2023(02)00023-3

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  299 in total

1.  Purification and functional characterization of the human N-CoR complex: the roles of HDAC3, TBL1 and TBLR1.

Authors:  Ho-Geun Yoon; Doug W Chan; Zhi-Qing Huang; Jiwen Li; Joseph D Fondell; Jun Qin; Jiemin Wong
Journal:  EMBO J       Date:  2003-03-17       Impact factor: 11.598

2.  Independent combinatorial effect of antisense oligonucleotides and RNAi-mediated specific inhibition of the recombinant rat P2X3 receptor.

Authors:  Maja Hemmings-Mieszczak; Gabriele Dorn; François J Natt; Jonathan Hall; William L Wishart
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

3.  Role of PACS-1 in trafficking of human cytomegalovirus glycoprotein B and virus production.

Authors:  Colin M Crump; Chien-Hui Hung; Laurel Thomas; Lei Wan; Gary Thomas
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103

Review 4.  RNA interference: biology, mechanism, and applications.

Authors:  Neema Agrawal; P V N Dasaradhi; Asif Mohmmed; Pawan Malhotra; Raj K Bhatnagar; Sunil K Mukherjee
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

5.  High-throughput selection of effective RNAi probes for gene silencing.

Authors:  Rajeev Kumar; Douglas S Conklin; Vivek Mittal
Journal:  Genome Res       Date:  2003-10       Impact factor: 9.043

6.  RNA interference of STAT6 rapidly attenuates ongoing interleukin-13-mediated events in lung epithelial cells.

Authors:  William Walker; Gareth D Healey; Julian M Hopkin
Journal:  Immunology       Date:  2008-10-29       Impact factor: 7.397

7.  An approach to genomewide screens of expressed small interfering RNAs in mammalian cells.

Authors:  Lianxing Zheng; Jun Liu; Sergei Batalov; Demin Zhou; Anthony Orth; Sheng Ding; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-19       Impact factor: 11.205

8.  Adenoviral vectors expressing siRNAs for discovery and validation of gene function.

Authors:  Gert-Jan Arts; Ellen Langemeijer; Rudi Tissingh; Libin Ma; Heidi Pavliska; Kristina Dokic; Richele Dooijes; Emir Mesić; Remko Clasen; Frits Michiels; Jan van der Schueren; Mark Lambrecht; Sofie Herman; Reginald Brys; Kim Thys; Marcel Hoffmann; Peter Tomme; Helmuth van Es
Journal:  Genome Res       Date:  2003-09-15       Impact factor: 9.043

9.  Nuclear pore protein gp210 is essential for viability in HeLa cells and Caenorhabditis elegans.

Authors:  Merav Cohen; Naomi Feinstein; Katherine L Wilson; Yosef Gruenbaum
Journal:  Mol Biol Cell       Date:  2003-07-11       Impact factor: 4.138

10.  Daxx silencing sensitizes cells to multiple apoptotic pathways.

Authors:  Liuh-Yow Chen; J Don Chen
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

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