Literature DB >> 12052550

ERIC- and REP-PCR amplify non-repetitive fragments from the genome of Drechslera avenae and Stemphylium solani.

Angela Mehta1, Yeshwant R Mehta, Yoko B Rosato.   

Abstract

In the present study, the homology relationships among fragments amplified by ERIC (Enterobacterial Repetitive Intergenic Consensus) and REP (Repetitive Extragenic Palindromic) primers in Drechslera avenae and Stemphylium solani causing leaf blotch and black spot of oats and leaf blight of cotton, respectively, were investigated by Southern hybridization followed by DNA sequencing. ERIC- and REP-PCR were performed for 24 isolates of D. avenae and 33 isolates of S. solani. The banding patterns obtained were transferred to nylon membranes and a total of 16 fragments, four ERIC and four REP bands from each fungus, used as probes. The hybridization and DNA sequencing revealed a low degree of similarity among the bands indicating that the regions amplified by these primers are not repetitive and that the primers anneal at random regions in the genomes of D. avenae and S. solani.

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Year:  2002        PMID: 12052550     DOI: 10.1111/j.1574-6968.2002.tb11202.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  4 in total

1.  Evaluation of the intestinal microbial diversity in miniature pig after orally infected with Entamoeba histolytica.

Authors:  Guang-Zhi He; Yong Feng; Shu-Xuan Deng
Journal:  Parasitol Res       Date:  2012-08       Impact factor: 2.289

2.  Stemphylium lycopersici Nep1-like Protein (NLP) Is a Key Virulence Factor in Tomato Gray Leaf Spot Disease.

Authors:  Jiajie Lian; Hongyu Han; Xizhan Chen; Qian Chen; Jiuhai Zhao; Chuanyou Li
Journal:  J Fungi (Basel)       Date:  2022-05-18

3.  Comparative analysis of intestinal microbial community diversity between healthy and orally infected ducklings with Salmonella enteritidis by ERIC-PCR.

Authors:  Sheng-Yan Cao; Ming-Shu Wang; An-Chun Cheng; Xue-Feng Qi; Xiao-Yan Yang; Shu-Xuan Deng; Nian-Chun Yin; Zhen-Hua Zhang; Deng-Chun Zhou; De-Kang Zhu; Qi-Hui Luo; Xiao-Yue Chen
Journal:  World J Gastroenterol       Date:  2008-02-21       Impact factor: 5.742

4.  Intestinal microbial community diversity between healthy and orally infected rabbit with Entamoeba histolytica by ERIC-PCR.

Authors:  Guang-Zhi He; Shu-Xuan Deng; Ning Qian
Journal:  Parasitol Res       Date:  2012-05-05       Impact factor: 2.289

  4 in total

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