Literature DB >> 12050076

ENDscript: a workflow to display sequence and structure information.

Patrice Gouet1, Emmanuel Courcelle.   

Abstract

UNLABELLED: ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. AVAILABILITY: http://genopole.toulouse.inra.fr/ENDscript

Mesh：

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Year:  2002        PMID： 12050076     DOI： 10.1093/bioinformatics/18.5.767

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  23 in total

1.  ESPript/ENDscript: Extracting and rendering sequence and 3D information from atomic structures of proteins.

Authors:  Patrice Gouet; Xavier Robert; Emmanuel Courcelle
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  Crystal structure of human Edc3 and its functional implications.

Authors:  Sharon H M Ling; Carolyn J Decker; Martin A Walsh; Meipei She; Roy Parker; Haiwei Song
Journal:  Mol Cell Biol       Date:  2008-08-04       Impact factor: 4.272

3.  Modeling of the human rhinovirus C capsid suggests possible causes for antiviral drug resistance.

Authors:  Holly A Basta; Shamaila Ashraf; Jean-Yves Sgro; Yury A Bochkov; James E Gern; Ann C Palmenberg
Journal:  Virology       Date:  2013-10-20       Impact factor: 3.616

Review 4.  Arylamine N-acetyltransferases: a structural perspective.

Authors:  Xiaotong Zhou; Zhiguo Ma; Dong Dong; Baojian Wu
Journal:  Br J Pharmacol       Date:  2013-06       Impact factor: 8.739

5.  Structural characterization of the predominant family of histidine kinase sensor domains.

Authors:  Zhen Zhang; Wayne A Hendrickson
Journal:  J Mol Biol       Date:  2010-05-08       Impact factor: 5.469

6.  Crystal structures of a multifunctional triterpene/flavonoid glycosyltransferase from Medicago truncatula.

Authors:  Hui Shao; Xianzhi He; Lahoucine Achnine; Jack W Blount; Richard A Dixon; Xiaoqiang Wang
Journal:  Plant Cell       Date:  2005-10-07       Impact factor: 11.277

7.  Structure of Arabidopsis chloroplastic monothiol glutaredoxin AtGRXcp.

Authors:  Lenong Li; Ninghui Cheng; Kendal D Hirschi; Xiaoqiang Wang
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-05-15

8.  1,3-Propanediol dehydrogenase from Klebsiella pneumoniae: decameric quaternary structure and possible subunit cooperativity.

Authors:  David Marçal; Ana Toste Rêgo; Maria Arménia Carrondo; Francisco J Enguita
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

9.  Enhanced activity of Withania somnifera family-1 glycosyltransferase (UGT73A16) via mutagenesis.

Authors:  Somesh Singh; Krunal A Patel; Prashant D Sonawane; Rishi K Vishwakarma; Bashir M Khan
Journal:  World J Microbiol Biotechnol       Date:  2018-09-25       Impact factor: 3.312

10.  Crystal structures of apparent saccharide sensors from histidine kinase receptors prevalent in a human gut symbiont.

Authors:  Zhen Zhang; Qun Liu; Wayne A Hendrickson
Journal:  FEBS J       Date:  2014-08-04       Impact factor: 5.542
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