Literature DB >> 12050060

A heuristic managing errors for DNA sequencing.

Jacek Błazewicz1, Piotr Formanowicz, Frederic Guinand, Marta Kasprzak.   

Abstract

MOTIVATION: A new heuristic algorithm for solving DNA sequencing by hybridization problem with positive and negative errors.
RESULTS: A heuristic algorithm providing better solutions than algorithms known from the literature based on tabu search method.

Mesh:

Substances:

Year:  2002        PMID: 12050060     DOI: 10.1093/bioinformatics/18.5.652

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  3 in total

1.  Genome-scale de novo assembly using ALGA.

Authors:  Sylwester Swat; Artur Laskowski; Jan Badura; Wojciech Frohmberg; Pawel Wojciechowski; Aleksandra Swiercz; Marta Kasprzak; Jacek Blazewicz
Journal:  Bioinformatics       Date:  2021-01-20       Impact factor: 6.937

2.  Bioinformatics and computational biology in Poland.

Authors:  Janusz M Bujnicki; Jerzy Tiuryn
Journal:  PLoS Comput Biol       Date:  2013-05-02       Impact factor: 4.475

3.  GRASShopPER-An algorithm for de novo assembly based on GPU alignments.

Authors:  Aleksandra Swiercz; Wojciech Frohmberg; Michal Kierzynka; Pawel Wojciechowski; Piotr Zurkowski; Jan Badura; Artur Laskowski; Marta Kasprzak; Jacek Blazewicz
Journal:  PLoS One       Date:  2018-08-16       Impact factor: 3.240

  3 in total

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