Literature DB >> 12047940

A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein.

Patrick Forterre1.   

Abstract

I have looked for proteins that are present in all hyperthermophile genomes, but absent from all mesophile or thermophile genomes by using the phylogenetic pattern search program of the COG database. Surprisingly, this search retrieved only one such hyperthermophile-specific protein: reverse gyrase. This result emphasizes the importance of reverse gyrase in the adaptation of life to very high temperatures, and strengthens the idea that evolution of this enzyme was crucial in the origin of hyperthermophiles.

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Year:  2002        PMID: 12047940     DOI: 10.1016/s0168-9525(02)02650-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  81 in total

1.  Extremophiles 2002.

Authors:  Mosè Rossi; Maria Ciaramella; Raffaele Cannio; Francesca M Pisani; Marco Moracci; Simonetta Bartolucci
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

2.  Reverse gyrase has heat-protective DNA chaperone activity independent of supercoiling.

Authors:  Martin Kampmann; Daniela Stock
Journal:  Nucleic Acids Res       Date:  2004-07-06       Impact factor: 16.971

3.  Reverse gyrase is not a prerequisite for hyperthermophilic life.

Authors:  Haruyuki Atomi; Rie Matsumi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

4.  Synergic and opposing activities of thermophilic RecQ-like helicase and topoisomerase 3 proteins in Holliday junction processing and replication fork stabilization.

Authors:  Anna Valenti; Mariarita De Felice; Giuseppe Perugino; Anna Bizard; Marc Nadal; Mosè Rossi; Maria Ciaramella
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

5.  Separate and combined biochemical activities of the subunits of a naturally split reverse gyrase.

Authors:  Christopher Capp; Yushen Qian; Harvey Sage; Harald Huber; Tao-Shih Hsieh
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

6.  Discontinuity and limited linkage in the homologous recombination system of a hyperthermophilic archaeon.

Authors:  Dennis W Grogan; Jananie Rockwood
Journal:  J Bacteriol       Date:  2010-07-19       Impact factor: 3.490

Review 7.  The origin and evolution of Archaea: a state of the art.

Authors:  Simonetta Gribaldo; Celine Brochier-Armanet
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-06-29       Impact factor: 6.237

8.  PCOGR: phylogenetic COG ranking as an online tool to judge the specificity of COGs with respect to freely definable groups of organisms.

Authors:  Florian Meereis; Michael Kaufmann
Journal:  BMC Bioinformatics       Date:  2004-10-15       Impact factor: 3.169

9.  Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus.

Authors:  Hideto Takami; Yoshihiro Takaki; Gab-Joo Chee; Shinro Nishi; Shigeru Shimamura; Hiroko Suzuki; Satomi Matsui; Ikuo Uchiyama
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

10.  A novel nuclease-ATPase (Nar71) from archaea is part of a proposed thermophilic DNA repair system.

Authors:  Colin P Guy; Alan I Majerník; James P J Chong; Edward L Bolt
Journal:  Nucleic Acids Res       Date:  2004-11-29       Impact factor: 16.971

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