Literature DB >> 12047229

A set of cattle microsatellite DNA markers for genome analysis of riverine buffalo (Bubalus bubalis).

N Navani1, P K Jain, S Gupta, B S Sisodia, S Kumar.   

Abstract

One hundred and eight microsatellite primer pairs, originally identified from cattle, were evaluated for their applicability in buffalo. Eighty-one primer pairs (75%) amplified discrete products, and of these, 61 pairs (56%) gave polymorphic band patterns on a panel of 25 buffaloes. The mean number of alleles per polymorphic marker was 4.50 +/- 0.20, and the mean heterozygosity per polymorphic marker was 0.66 +/- 0.02. Successful genotyping of buffaloes using cattle specific primers suggests that the latter can be a valuable resource for genome analysis in bubaline species.

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Year:  2002        PMID： 12047229     DOI： 10.1046/j.1365-2052.2002.00823.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN： 0268-9146            Impact factor:   3.169


  10 in total

1.  Evaluation of genetic variability and mutation drift equilibrium of Banni buffalo using multi locus microsatellite markers.

Authors:  B P Mishra; R S Kataria; P Kathiravan; S S Bulandi; K P Singh; D K Sadana
Journal:  Trop Anim Health Prod       Date:  2009-01-09       Impact factor: 1.559

2.  Microsatellite-based genetic monitoring to detect cryptic demographic bottleneck in Indian riverine buffaloes (Bubalus bubalis).

Authors:  Ranjit S Kataria; Periasamy Kathiravan; Shyam S Bulandi; D Pandey; Bishnu P Mishra
Journal:  Trop Anim Health Prod       Date:  2009-11-20       Impact factor: 1.559

3.  Power of exclusion of 19 microsatellite markers for parentage testing in river buffalo (Bubalus bubalis).

Authors:  P Kathiravan; R S Kataria; B P Mishra
Journal:  Mol Biol Rep       Date:  2012-05-04       Impact factor: 2.316

4.  Exploration of allelic variants in short tandem repeats (STRs) flanking milk production QTLs and their association with milk production traits in Indian water buffaloes.

Authors:  A Vani; Subodh Kumar; Sanjeev Kumar; Anuj Chauhan; Nihar Ranjan Sahoo; Med Ram Verma; A K S Tomar; Pushpendra Kumar
Journal:  Trop Anim Health Prod       Date:  2022-06-30       Impact factor: 1.893

5.  Phylogeography and domestication of Chinese swamp buffalo.

Authors:  Xiang-Peng Yue; Ran Li; Wen-Mei Xie; Ping Xu; Ti-Cheng Chang; Li Liu; Feng Cheng; Run-Feng Zhang; Xian-Yong Lan; Hong Chen; Chu-Zhao Lei
Journal:  PLoS One       Date:  2013-02-20       Impact factor: 3.240

6.  Whole Mitogenomes Reveal the History of Swamp Buffalo: Initially Shaped by Glacial Periods and Eventually Modelled by Domestication.

Authors:  S Wang; N Chen; M R Capodiferro; T Zhang; H Lancioni; H Zhang; Y Miao; V Chanthakhoun; M Wanapat; M Yindee; Y Zhang; H Lu; L Caporali; R Dang; Y Huang; X Lan; M Plath; H Chen; J A Lenstra; A Achilli; C Lei
Journal:  Sci Rep       Date:  2017-07-05       Impact factor: 4.379

7.  Evaluation of Genetic Diversity and Structure of Turkish Water Buffalo Population by Using 20 Microsatellite Markers.

Authors:  Emel Özkan Ünal; Raziye Işık; Ayşe Şen; Elif Geyik Kuş; Mehmet İhsan Soysal
Journal:  Animals (Basel)       Date:  2021-04-09       Impact factor: 2.752

8.  Microsatellite markers of water buffalo, Bubalus bubalis--development, characterisation and linkage disequilibrium studies.

Authors:  Muniyandi Nagarajan; Niraj Kumar; Gopala Nishanth; Ramachandran Haribaskar; Karthikeyani Paranthaman; Jalaj Gupta; Manish Mishra; R Vaidhegi; Shantanu Kumar; Amresh K Ranjan; Satish Kumar
Journal:  BMC Genet       Date:  2009-10-21       Impact factor: 2.797

9.  In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalus bubalis) and development of first BuffSatDB.

Authors:  Vasu Arora; Mir Asif Iquebal; Anil Rai; Dinesh Kumar
Journal:  BMC Genomics       Date:  2013-01-19       Impact factor: 3.969

10.  Genomic conservation of cattle microsatellite loci in wild gaur (Bos gaurus) and current genetic status of this species in Vietnam.

Authors:  Trung Thanh Nguyen; Sem Genini; Linh Chi Bui; Peter Voegeli; Gerald Stranzinger; Jean-Paul Renard; Jean-Charles Maillard; Bui Xuan Nguyen
Journal:  BMC Genet       Date:  2007-11-06       Impact factor: 2.797
  10 in total

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