Literature DB >> 12034860

The consensus concept for thermostability engineering of proteins: further proof of concept.

Martin Lehmann1, Claudia Loch, Anke Middendorf, Dominik Studer, Søren F Lassen, Luis Pasamontes, Adolphus P G M van Loon, Markus Wyss.   

Abstract

Previously, we calculated a consensus amino acid sequence from 13 homologous fungal phytases. A synthetic gene was constructed and recombinantly expressed. Surprisingly, consensus phytase-1 was 15-26 degrees C more thermostable than all parent phytases used in its design [Lehmann et al. (2000)Protein Eng., 13, 49-57]. In the present study, inclusion of six further phytase sequences in the amino acid sequence alignment resulted in the replacement of 38 amino acid residues in either one or both of the new consensus phytases-10 and -11. Since consensus phytase-10, again, was 7.4 degrees C more thermostable than consensus phytase-1, the thermostability effects of most of the 38 amino acid substitutions were tested by site-directed mutagenesis. Both stabilizing and destabilizing mutations were identified, but all affected the stability of the enzyme by <3 degrees C. The combination of all stabilizing amino acid exchanges in a multiple mutant of consensus phytase-1 increased the unfolding temperature from 78.0 to 88.5 degrees C. Likewise, back-mutation of four destabilizing amino acids and introduction of an additional stabilizing amino acid in consensus phytase-10 further increased the unfolding temperature from 85.4 to 90.4 degrees C. The thermostabilization achieved is the result of a combination of slight improvements from multiple amino acid exchanges rather than being the effect of a single or of just a few dominating mutations that have been introduced by chance. The present findings support the general validity of the consensus concept for thermostability engineering of proteins.

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Year:  2002        PMID: 12034860     DOI: 10.1093/protein/15.5.403

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  57 in total

1.  Designed to be stable: crystal structure of a consensus ankyrin repeat protein.

Authors:  Andreas Kohl; H Kaspar Binz; Patrik Forrer; Michael T Stumpp; Andreas Plückthun; Markus G Grütter
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-03       Impact factor: 11.205

2.  Comparison of family 12 glycoside hydrolases and recruited substitutions important for thermal stability.

Authors:  Mats Sandgren; Peter J Gualfetti; Andrew Shaw; Laurie S Gross; Mae Saldajeno; Anthony G Day; T Alwyn Jones; Colin Mitchinson
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

3.  Sequence and structure-based comparative analysis to assess, identify and improve the thermostability of penicillin G acylases.

Authors:  Priyabrata Panigrahi; Deepak Chand; Ruchira Mukherji; Sureshkumar Ramasamy; C G Suresh
Journal:  J Ind Microbiol Biotechnol       Date:  2015-09-29       Impact factor: 3.346

4.  Energetics of aliphatic deletions in protein cores.

Authors:  Marta Bueno; Luis A Campos; Jorge Estrada; Javier Sancho
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

Review 5.  Protein stability by number: high-throughput and statistical approaches to one of protein science's most difficult problems.

Authors:  Thomas J Magliery; Jason J Lavinder; Brandon J Sullivan
Journal:  Curr Opin Chem Biol       Date:  2011-04-15       Impact factor: 8.822

6.  Improvement of the thermostability and activity of a pectate lyase by single amino acid substitutions, using a strategy based on melting-temperature-guided sequence alignment.

Authors:  Zhizhuang Xiao; Hélène Bergeron; Stephan Grosse; Manon Beauchemin; Marie-Line Garron; David Shaya; Traian Sulea; Miroslaw Cygler; Peter C K Lau
Journal:  Appl Environ Microbiol       Date:  2007-12-21       Impact factor: 4.792

7.  Protein engineering by random mutagenesis and structure-guided consensus of Geobacillus stearothermophilus Lipase T6 for enhanced stability in methanol.

Authors:  Adi Dror; Einav Shemesh; Natali Dayan; Ayelet Fishman
Journal:  Appl Environ Microbiol       Date:  2013-12-20       Impact factor: 4.792

8.  Mutational effects on stability are largely conserved during protein evolution.

Authors:  Orr Ashenberg; L Ian Gong; Jesse D Bloom
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

9.  Redesigning enzymes based on adaptive evolution for optimal function in synthetic metabolic pathways.

Authors:  Yasuo Yoshikuni; Jeffrey A Dietrich; Farnaz F Nowroozi; Patricia C Babbitt; Jay D Keasling
Journal:  Chem Biol       Date:  2008-06

10.  Improving the thermal stability of cellobiohydrolase Cel7A from Hypocrea jecorina by directed evolution.

Authors:  Frits Goedegebuur; Lydia Dankmeyer; Peter Gualfetti; Saeid Karkehabadi; Henrik Hansson; Suvamay Jana; Vicky Huynh; Bradley R Kelemen; Paulien Kruithof; Edmund A Larenas; Pauline J M Teunissen; Jerry Ståhlberg; Christina M Payne; Colin Mitchinson; Mats Sandgren
Journal:  J Biol Chem       Date:  2017-08-31       Impact factor: 5.157

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