Literature DB >> 12033921

Calorimetric demonstration of the potential of molecular crowding to emulate the effect of an allosteric activator on pyruvate kinase kinetics.

Thierry G A Lonhienne1, Donald J Winzor.   

Abstract

A method based on isothermal calorimetry is described for the direct kinetic assay of pyruvate kinase. In agreement with earlier findings based on the standard coupled assay system for this enzyme in the presence of a fixed ADP concentration, the essentially rectangular hyperbolic dependence of initial velocity upon phosphoenolpyruvate concentration is rendered sigmoidal by the allosteric inhibitor phenylalanine. This effect of phenylalanine can be countered by including a high concentration of a space-filling osmolyte such as proline in the reaction mixtures. This investigation thus affords a dramatic example that illustrates the need to consider potential consequences of thermodynamic nonideality on the kinetics of enzyme reactions in crowded molecular environments such as the cell cytoplasm.

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Year:  2002        PMID: 12033921     DOI: 10.1021/bi020064h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  The pyruvate kinase model system, a cautionary tale for the use of osmolyte perturbations to support conformational equilibria in allostery.

Authors:  Aron W Fenton; Troy A Johnson; Todd Holyoak
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

Review 2.  Modulation of allostery of pyruvate kinase by shifting of an ensemble of microstates.

Authors:  J Ching Lee
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2008-07       Impact factor: 3.848

3.  An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.

Authors:  Meng Yuan; Iain W McNae; Yiyuan Chen; Elizabeth A Blackburn; Martin A Wear; Paul A M Michels; Linda A Fothergill-Gilmore; Ted Hupp; Malcolm D Walkinshaw
Journal:  Biochem J       Date:  2018-05-31       Impact factor: 3.857

Review 4.  Structured crowding and its effects on enzyme catalysis.

Authors:  Buyong Ma; Ruth Nussinov
Journal:  Top Curr Chem       Date:  2013

Review 5.  Enzyme Kinetics by Isothermal Titration Calorimetry: Allostery, Inhibition, and Dynamics.

Authors:  Yun Wang; Guanyu Wang; Nicolas Moitessier; Anthony K Mittermaier
Journal:  Front Mol Biosci       Date:  2020-10-19
  5 in total

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