Literature DB >> 12021453

X-ray crystallographic and kinetic correlation of a clinically observed human fumarase mutation.

Marcel Estévez1, Jeremy Skarda, Josh Spencer, Leonard Banaszak, Todd M Weaver.   

Abstract

Fumarase catalyzes the reversible conversion of fumarate to S- malate during the operation of the ubiquitous Kreb's cycle. Previous studies have shown that the active site includes side chains from three of the four subunits within the tetrameric enzyme. We used a clinically observed human mutation to narrow our search for potential catalytic groups within the fumarase active site. Offspring homozygous for the missense mutation, a G-955-C transversion in the fumarase gene, results in the substitution of a glutamine at amino acid 319 for the normal glutamic acid. To more fully understand the implications of this mutation, a single-step site-directed mutagenesis method was used to generate the homologous substitution at position 315 within fumarase C from Escherichia coli. Subsequent kinetic and X-ray crystal structure analyses show changes in the turnover number and the cocrystal structure with bound citrate.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12021453      PMCID: PMC2373640          DOI: 10.1110/ps.0201502

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  9 in total

1.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
Journal:  Acta Crystallogr A       Date:  1991-03-01       Impact factor: 2.290

2.  Crystallographic R factor refinement by molecular dynamics.

Authors:  A T Brünger; J Kuriyan; M Karplus
Journal:  Science       Date:  1987-01-23       Impact factor: 47.728

3.  Structural and functional relationships between fumarase and aspartase. Nucleotide sequences of the fumarase (fumC) and aspartase (aspA) genes of Escherichia coli K12.

Authors:  S A Woods; J S Miles; R E Roberts; J R Guest
Journal:  Biochem J       Date:  1986-07-15       Impact factor: 3.857

4.  The multisubunit active site of fumarase C from Escherichia coli.

Authors:  T M Weaver; D G Levitt; M I Donnelly; P P Stevens; L J Banaszak
Journal:  Nat Struct Biol       Date:  1995-08

5.  Mutations of fumarase that distinguish between the active site and a nearby dicarboxylic acid binding site.

Authors:  T Weaver; M Lees; L Banaszak
Journal:  Protein Sci       Date:  1997-04       Impact factor: 6.725

6.  Kinetics of enzymes with iso-mechanisms: dead-end inhibition of fumarase and carbonic anhydrase II.

Authors:  K L Rebholz; D B Northrop
Journal:  Arch Biochem Biophys       Date:  1994-07       Impact factor: 4.013

7.  Purification and crystallization of fumarase C from Escherichia coli.

Authors:  T M Weaver; D G Levitt; L J Banaszak
Journal:  J Mol Biol       Date:  1993-05-05       Impact factor: 5.469

8.  Mutation of the fumarase gene in two siblings with progressive encephalopathy and fumarase deficiency.

Authors:  T Bourgeron; D Chretien; J Poggi-Bach; S Doonan; D Rabier; P Letouzé; A Munnich; A Rötig; P Landrieu; P Rustin
Journal:  J Clin Invest       Date:  1994-06       Impact factor: 14.808

9.  How fumarase recycles after the malate --> fumarate reaction. Insights into the reaction mechanism.

Authors:  I A Rose
Journal:  Biochemistry       Date:  1998-12-22       Impact factor: 3.162

  9 in total
  12 in total

1.  Selective small molecule inhibitor of the Mycobacterium tuberculosis fumarate hydratase reveals an allosteric regulatory site.

Authors:  Monica Kasbekar; Gerhard Fischer; Bryan T Mott; Adam Yasgar; Marko Hyvönen; Helena I M Boshoff; Chris Abell; Clifton E Barry; Craig J Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-20       Impact factor: 11.205

2.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of recombinant human fumarase.

Authors:  Ricardo Augusto Pereira de Pádua; Maria Cristina Nonato
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

Review 3.  Fumaric aciduria: an overview and the first Brazilian case report.

Authors:  Gabriella Allegri; Marcia J Fernandes; Fernanda B Scalco; Patricia Correia; Ruth E Simoni; Juan C Llerena; Maria L Costa de Oliveira
Journal:  J Inherit Metab Dis       Date:  2010-06-15       Impact factor: 4.982

4.  Identification of a novel fumarase C from Streptomyces lividans TK54 as a good candidate for L-malate production.

Authors:  Rui-Rui Su; Ao Wang; Song-Tao Hou; Peng Gao; Guo-Ping Zhu; Wen Wang
Journal:  Mol Biol Rep       Date:  2013-12-05       Impact factor: 2.316

5.  Identification and characterization of a novel fumarase gene by metagenome expression cloning from marine microorganisms.

Authors:  Chengjian Jiang; Lan-Lan Wu; Gao-Chao Zhao; Pei-Hong Shen; Ke Jin; Zhen-Yu Hao; Shuang-Xi Li; Ge-Fei Ma; Feng-Feng Luo; Guo-Qing Hu; Wen-Long Kang; Xing-Mei Qin; You-Li Bi; Xian-Lai Tang; Bo Wu
Journal:  Microb Cell Fact       Date:  2010-11-23       Impact factor: 5.328

6.  Structure of fumarate hydratase from Rickettsia prowazekii, the agent of typhus and suspected relative of the mitochondria.

Authors:  Isabelle Phan; Sandhya Subramanian; Christian Olsen; Thomas E Edwards; Wenjin Guo; Yang Zhang; Wesley C Van Voorhis; Lance J Stewart; Peter J Myler
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-08-16

7.  A spectrophotometric coupled enzyme assay to measure the activity of succinate dehydrogenase.

Authors:  Andrew J Y Jones; Judy Hirst
Journal:  Anal Biochem       Date:  2013-07-22       Impact factor: 3.365

8.  Systematic Search for Evidence of Interdomain Horizontal Gene Transfer from Prokaryotes to Oomycete Lineages.

Authors:  Charley G P McCarthy; David A Fitzpatrick
Journal:  mSphere       Date:  2016-09-14       Impact factor: 4.389

Review 9.  From Metabolism to Genetics and Vice Versa: The Rising Role of Oncometabolites in Cancer Development and Therapy.

Authors:  Emanuela Di Gregorio; Gianmaria Miolo; Asia Saorin; Agostino Steffan; Giuseppe Corona
Journal:  Int J Mol Sci       Date:  2021-05-25       Impact factor: 5.923

10.  Identification of Activators of Human Fumarate Hydratase by Quantitative High-Throughput Screening.

Authors:  Hu Zhu; Olivia W Lee; Pranav Shah; Ajit Jadhav; Xin Xu; Samarjit Patnaik; Min Shen; Matthew D Hall
Journal:  SLAS Discov       Date:  2019-09-14       Impact factor: 3.341

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.