Literature DB >> 12021435

Conformational and thermodynamic properties of peptide binding to the human S100P protein.

Alexey V Gribenko1, Mercedes Guzmán-Casado, Maria M Lopez, George I Makhatadze.   

Abstract

S100P is a member of the S100 subfamily of calcium-binding proteins that are believed to be associated with various diseases, and in particular deregulation of S100P expression has been documented for prostate and breast cancer. Previously, we characterized the effects of metal binding on the conformational properties of S100P and proposed that S100P could function as a Ca2+ conformational switch. In this study we used fluorescence and CD spectroscopies and isothermal titration calorimetry to characterize the target-recognition properties of S100P using a model peptide, melittin. Based on these experimental data we show that S100P and melittin can interact in a Ca2+-dependent and -independent manner. Ca2+-independent binding occurs with low affinity (Kd approximately 0.2 mM), has a stoichiometry of four melittin molecules per S100P dimer and is presumably driven by favorable electrostatic interactions between the acidic protein and the basic peptide. In contrast, Ca2+-dependent binding of melittin to S100P occurs with high affinity (Kd approximately 5 microM) has a stoichiometry of two molecules of melittin per S100P dimer, appears to have positive cooperativity, and is driven by hydrophobic interactions. Furthermore, Ca2+-dependent S100P-melittin complex formation is accompanied by significant conformational changes: Melittin, otherwise unstructured in solution, adopts a helical conformation upon interaction with Ca2+-S100P. These results support a model for the Ca2+-dependent conformational switch in S100P for functional target recognition.

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Year:  2002        PMID: 12021435      PMCID: PMC2373636          DOI: 10.1110/ps.0202202

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  33 in total

1.  Interactions of the cold shock protein CspB from Bacillus subtilis with single-stranded DNA. Importance of the T base content and position within the template.

Authors:  M M Lopez; K Yutani; G I Makhatadze
Journal:  J Biol Chem       Date:  2001-01-29       Impact factor: 5.157

2.  Structural basis of the Ca(2+)-dependent association between S100C (S100A11) and its target, the N-terminal part of annexin I.

Authors:  S Réty; D Osterloh; J P Arié; S Tabaries; J Seeman; F Russo-Marie; V Gerke; A Lewit-Bentley
Journal:  Structure       Date:  2000-02-15       Impact factor: 5.006

3.  Structure of the negative regulatory domain of p53 bound to S100B(betabeta).

Authors:  R R Rustandi; D M Baldisseri; D J Weber
Journal:  Nat Struct Biol       Date:  2000-07

4.  Molecular characterization and tissue distribution of a novel member of the S100 family of EF-hand proteins.

Authors:  A V Gribenko; J E Hopper; G I Makhatadze
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

5.  Isothermal titration calorimetry.

Authors:  Maria M Lopez; George I Makhatadze
Journal:  Methods Mol Biol       Date:  2002

6.  Interactions of the major cold shock protein of Bacillus subtilis CspB with single-stranded DNA templates of different base composition.

Authors:  M M Lopez; K Yutani; G I Makhatadze
Journal:  J Biol Chem       Date:  1999-11-19       Impact factor: 5.157

7.  Energetics of target peptide binding by calmodulin reveals different modes of binding.

Authors:  R D Brokx; M M Lopez; H J Vogel; G I Makhatadze
Journal:  J Biol Chem       Date:  2001-01-29       Impact factor: 5.157

8.  Solvation energetics and conformational change in EF-hand proteins.

Authors:  A Ababou; J R Desjarlais
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

9.  Tryptophan fluorescence of calmodulin binding domain peptides interacting with calmodulin containing unnatural methionine analogues.

Authors:  A M Weljie; H J Vogel
Journal:  Protein Eng       Date:  2000-01

Review 10.  Functional roles of S100 proteins, calcium-binding proteins of the EF-hand type.

Authors:  R Donato
Journal:  Biochim Biophys Acta       Date:  1999-07-08
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  14 in total

1.  Ca2+-dependent binding and activation of dormant ezrin by dimeric S100P.

Authors:  Max Koltzscher; Claudia Neumann; Simone König; Volker Gerke
Journal:  Mol Biol Cell       Date:  2003-06       Impact factor: 4.138

2.  NMR structure of the Apo-S100P protein.

Authors:  Yi-Chien Lee; David E Volk; Varatharasa Thiviyanathan; Quinn Kleerekoper; Alexey V Gribenko; Shanmin Zhang; David G Gorenstein; George I Makhatadze; Bruce A Luxon
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

3.  Expression of S100P and its novel binding partner S100PBPR in early pancreatic cancer.

Authors:  Sally E Dowen; Tatjana Crnogorac-Jurcevic; Rathi Gangeswaran; Mikkel Hansen; Jyrki J Eloranta; Vipul Bhakta; Teresa A Brentnall; Jutta Lüttges; Gunther Klöppel; Nick R Lemoine
Journal:  Am J Pathol       Date:  2005-01       Impact factor: 4.307

4.  Modulation of quaternary structure of S100 proteins by calcium ions.

Authors:  Werner W Streicher; Maria M Lopez; George I Makhatadze
Journal:  Biophys Chem       Date:  2010-06-23       Impact factor: 2.352

Review 5.  Calcium-dependent and -independent interactions of the S100 protein family.

Authors:  Liliana Santamaria-Kisiel; Anne C Rintala-Dempsey; Gary S Shaw
Journal:  Biochem J       Date:  2006-06-01       Impact factor: 3.857

6.  Calcium- and magnesium-dependent interactions between calcium- and integrin-binding protein and the integrin alphaIIb cytoplasmic domain.

Authors:  Aaron P Yamniuk; Hans J Vogel
Journal:  Protein Sci       Date:  2005-05-09       Impact factor: 6.725

7.  Annexin I and annexin II N-terminal peptides binding to S100 protein family members: specificity and thermodynamic characterization.

Authors:  Werner W Streicher; Maria M Lopez; George I Makhatadze
Journal:  Biochemistry       Date:  2009-03-31       Impact factor: 3.162

8.  Thermodynamic and kinetic analysis of peptides derived from CapZ, NDR, p53, HDM2, and HDM4 binding to human S100B.

Authors:  Lucas N Wafer; Werner W Streicher; Scott A McCallum; George I Makhatadze
Journal:  Biochemistry       Date:  2012-08-29       Impact factor: 3.162

9.  Novel interactions of the TRTK12 peptide with S100 protein family members: specificity and thermodynamic characterization.

Authors:  Lucas N Wafer; Franco O Tzul; Pranav P Pandharipande; George I Makhatadze
Journal:  Biochemistry       Date:  2013-08-15       Impact factor: 3.162

10.  Structural and thermodynamic characterization of the recognition of the S100-binding peptides TRTK12 and p53 by calmodulin.

Authors:  Lucas N Wafer; Franco O Tzul; Pranav P Pandharipande; Scott A McCallum; George I Makhatadze
Journal:  Protein Sci       Date:  2014-07-02       Impact factor: 6.725

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