Literature DB >> 12020819

Apobec-1 transcription in rat colon cancer: decreased apobec-1 protein production through alterations in polysome distribution and mRNA translation associated with upstream AUGs.

Shrikant Anant1, Debnath Mukhopadhyay, Ken-Ichi Hirano, Thomas A Brasitus, Nicholas O Davidson.   

Abstract

Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. Rat apobec-1 is transcribed from three distinct promoters, which contain distinct 5' untranslated regions (5'UTRs) accompanied by variable numbers of in-frame upstream AUGs (uAUGs). We have observed a shift in apobec-1 promoter usage in an experimental model of colon carcinogenesis, resulting in transcripts loaded with 5'AUGs. In colon cancer, apobec-1 protein levels decreased by 90% in the cancer tissue as compared to normal tissue, suggesting an inhibitory effect of the 5'UTR on apobec-1 translation. We investigated the effects of these different 5'UTRs by site-directed mutagenesis coupled with in vitro translation studies. These studies established that the uAUGs within the 5'UTR of the alternative transcripts inhibit apobec-1 translation. This effect was independent of the length of the 5'UTR. Further analysis demonstrated that these uAUGs altered the polysome distribution, shifting the mRNA towards a denser, post-polyribosomal fraction. These findings were confirmed in transient transfection studies in vivo using HepG2 cells, where functional expression of apobec-1 was restored by mutagenesis of the uAUGs. Taken together, these data imply that rat apobec-1 gene expression is downregulated through alternative promoter usage. This dominant translational control of apobec-1 gene expression is most plausibly exerted through uAUGs.

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Year:  2002        PMID: 12020819     DOI: 10.1016/s0167-4781(02)00250-6

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

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Authors:  Ignacio Gil-Bazo
Journal:  World J Gastroenterol       Date:  2007-11-28       Impact factor: 5.742

2.  The 5'-untranslated region of multidrug resistance associated protein 2 (MRP2; ABCC2) regulates downstream open reading frame expression through translational regulation.

Authors:  Yuanyuan Zhang; Tianyong Zhao; Wei Li; Mary Vore
Journal:  Mol Pharmacol       Date:  2009-11-04       Impact factor: 4.436

Review 3.  Pushing the limits of the scanning mechanism for initiation of translation.

Authors:  Marilyn Kozak
Journal:  Gene       Date:  2002-10-16       Impact factor: 3.688

4.  Evolution of alternative and constitutive regions of mammalian 5'UTRs.

Authors:  Alissa M Resch; Aleksey Y Ogurtsov; Igor B Rogozin; Svetlana A Shabalina; Eugene V Koonin
Journal:  BMC Genomics       Date:  2009-04-16       Impact factor: 3.969

5.  Molecular correlates of immune cytolytic subgroups in colorectal cancer by integrated genomics analysis.

Authors:  Constantinos Roufas; Ilias Georgakopoulos-Soares; Apostolos Zaravinos
Journal:  NAR Cancer       Date:  2021-03-02
  5 in total

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