Literature DB >> 12016592

Intron-size constraint as a mutational mechanism in Rothmund-Thomson syndrome.

Lisa L Wang1, Kim Worley, Anu Gannavarapu, Murali M Chintagumpala, Moise L Levy, Sharon E Plon.   

Abstract

Rothmund-Thomson syndrome (RTS) is an autosomal recessive disorder caused by deleterious mutations in the RECQL4 gene on chromosome 8. The RECQL4 gene structure is unusual because it contains many small introns <100 bp. We describe a proband with RTS who has a novel 11-bp intronic deletion, and we show that this mutation results in a 66-bp intron too small for proper splicing. Constraint on intron size may represent a general mutational mechanism, since human-genome analysis reveals that approximately 15% of genes have introns <100 bp and are therefore susceptible to size constraint. Thus, monitoring of intron size may allow detection of mutations missed by exon-by-exon approaches.

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Year:  2002        PMID: 12016592      PMCID: PMC384974          DOI: 10.1086/341234

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  12 in total

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Journal:  J Am Acad Dermatol       Date:  1992-11       Impact factor: 11.527

2.  Clinical manifestations in a cohort of 41 Rothmund-Thomson syndrome patients.

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Journal:  Am J Med Genet       Date:  2001-07-22

Review 3.  Exon recognition in vertebrate splicing.

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Journal:  J Biol Chem       Date:  1995-02-10       Impact factor: 5.157

4.  Rothmund-thomson syndrome responsible gene, RECQL4: genomic structure and products.

Authors:  S Kitao; N M Lindor; M Shiratori; Y Furuichi; A Shimamoto
Journal:  Genomics       Date:  1999-11-01       Impact factor: 5.736

5.  Human hypertension caused by mutations in WNK kinases.

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Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

6.  Rothmund-Thomson syndrome due to RECQ4 helicase mutations: report and clinical and molecular comparisons with Bloom syndrome and Werner syndrome.

Authors:  N M Lindor; Y Furuichi; S Kitao; A Shimamoto; C Arndt; S Jalal
Journal:  Am J Med Genet       Date:  2000-01-31

7.  Characterization of the effects of mutations in the putative branchpoint sequence of intron 4 on the splicing within the human lecithin:cholesterol acyltransferase gene.

Authors:  M Li; P H Pritchard
Journal:  J Biol Chem       Date:  2000-06-16       Impact factor: 5.157

8.  mRNA precursor splicing in vivo: sequence requirements determined by deletion analysis of an intervening sequence.

Authors:  V L van Santen; R A Spritz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

9.  Mutations in RECQL4 cause a subset of cases of Rothmund-Thomson syndrome.

Authors:  S Kitao; A Shimamoto; M Goto; R W Miller; W A Smithson; N M Lindor; Y Furuichi
Journal:  Nat Genet       Date:  1999-05       Impact factor: 38.330

10.  Splicing mutations of the polycystic kidney disease 1 (PKD1) gene induced by intronic deletion.

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Journal:  Hum Mol Genet       Date:  1995-04       Impact factor: 6.150

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  24 in total

1.  Detection of clinically relevant exonic copy-number changes by array CGH.

Authors:  Philip M Boone; Carlos A Bacino; Chad A Shaw; Patricia A Eng; Patricia M Hixson; Amber N Pursley; Sung-Hae L Kang; Yaping Yang; Joanna Wiszniewska; Beata A Nowakowska; Daniela del Gaudio; Zhilian Xia; Gayle Simpson-Patel; LaDonna L Immken; James B Gibson; Anne C-H Tsai; Jennifer A Bowers; Tyler E Reimschisel; Christian P Schaaf; Lorraine Potocki; Fernando Scaglia; Tomasz Gambin; Maciej Sykulski; Magdalena Bartnik; Katarzyna Derwinska; Barbara Wisniowiecka-Kowalnik; Seema R Lalani; Frank J Probst; Weimin Bi; Arthur L Beaudet; Ankita Patel; James R Lupski; Sau Wai Cheung; Pawel Stankiewicz
Journal:  Hum Mutat       Date:  2010-11-02       Impact factor: 4.878

2.  Rothmund-Thomson Syndrome-like RECQL4 truncating mutations cause a haploinsufficient low bone mass phenotype in mice.

Authors:  Wilson Castillo-Tandazo; Ann E Frazier; Natalie A Sims; Monique F Smeets; Carl R Walkley
Journal:  Mol Cell Biol       Date:  2020-12-23       Impact factor: 4.272

3.  Direct and indirect roles of RECQL4 in modulating base excision repair capacity.

Authors:  Shepherd H Schurman; Mohammad Hedayati; ZhengMing Wang; Dharmendra K Singh; Elzbieta Speina; Yongqing Zhang; Kevin Becker; Margaret Macris; Patrick Sung; David M Wilson; Deborah L Croteau; Vilhelm A Bohr
Journal:  Hum Mol Genet       Date:  2009-06-29       Impact factor: 6.150

4.  Clinical utility gene card for: Rothmund-Thomson syndrome.

Authors:  Lidia Larizza; Gaia Roversi; Alain Verloes
Journal:  Eur J Hum Genet       Date:  2012-11-28       Impact factor: 4.246

5.  Atypical Rothmund-Thomson syndrome in a patient with compound heterozygous mutations in RECQL4 gene and phenotypic features in RECQL4 syndromes.

Authors:  Yves Sznajer; H Annika Siitonen; Gaia Roversi; Chantal Dangoisse; Michèle Scaillon; France Ziereisen; Sylvie Tenoutasse; Marjo Kestilä; Lidia Larizza
Journal:  Eur J Pediatr       Date:  2007-03-20       Impact factor: 3.183

Review 6.  Human RECQ helicases: roles in DNA metabolism, mutagenesis and cancer biology.

Authors:  Raymond J Monnat
Journal:  Semin Cancer Biol       Date:  2010-10-08       Impact factor: 15.707

Review 7.  Rothmund-Thomson syndrome.

Authors:  Lidia Larizza; Gaia Roversi; Ludovica Volpi
Journal:  Orphanet J Rare Dis       Date:  2010-01-29       Impact factor: 4.123

8.  Origins and functional impact of copy number variation in the human genome.

Authors:  Donald F Conrad; Dalila Pinto; Richard Redon; Lars Feuk; Omer Gokcumen; Yujun Zhang; Jan Aerts; T Daniel Andrews; Chris Barnes; Peter Campbell; Tomas Fitzgerald; Min Hu; Chun Hwa Ihm; Kati Kristiansson; Daniel G Macarthur; Jeffrey R Macdonald; Ifejinelo Onyiah; Andy Wing Chun Pang; Sam Robson; Kathy Stirrups; Armand Valsesia; Klaudia Walter; John Wei; Chris Tyler-Smith; Nigel P Carter; Charles Lee; Stephen W Scherer; Matthew E Hurles
Journal:  Nature       Date:  2009-10-07       Impact factor: 49.962

9.  The mutation spectrum in RECQL4 diseases.

Authors:  H Annika Siitonen; Jenni Sotkasiira; Martine Biervliet; Abdelmadjid Benmansour; Yline Capri; Valerie Cormier-Daire; Barbara Crandall; Katariina Hannula-Jouppi; Raoul Hennekam; Denise Herzog; Kathelijn Keymolen; Marita Lipsanen-Nyman; Peter Miny; Sharon E Plon; Stefan Riedl; Ajoy Sarkar; Fernando R Vargas; Alain Verloes; Lisa L Wang; Helena Kääriäinen; Marjo Kestilä
Journal:  Eur J Hum Genet       Date:  2008-08-20       Impact factor: 4.246

10.  Recurrent RECQL4 imbalance and increased gene expression levels are associated with structural chromosomal instability in sporadic osteosarcoma.

Authors:  Georges Maire; Maisa Yoshimoto; Susan Chilton-MacNeill; Paul S Thorner; Maria Zielenska; Jeremy A Squire
Journal:  Neoplasia       Date:  2009-03       Impact factor: 5.715

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