Literature DB >> 12000851

RNA interference in mammalian cells using siRNAs synthesized with T7 RNA polymerase.

Olivier Donzé1, Didier Picard.   

Abstract

Methods that allow the specific silencing of a desired gene are invaluable tools for research. One of these is based on RNA interference (RNAi), a process by which double-stranded RNA (dsRNA) specifically suppresses the expression of a target mRNA. Recently, it has been reported that RNAi also works in mammalian cells if small interfering RNAs (siRNAs) are used to avoid activation of the interferon system by long dsRNA. Thus, RNAi could become a major tool for reverse genetics in mammalian systems. However, the high cost and the limited availability of the short synthetic RNAs and the lack of certainty that a designed siRNA will work present major drawbacks of the siRNA technology. Here we present an alternative method to obtain cheap and large amounts of siRNAs using T7 RNA polymerase. With multiple transfection procedures, including calcium phosphate co-precipitation, we demonstrate silencing of both exogenous and endogenous genes.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12000851      PMCID: PMC115300          DOI: 10.1093/nar/30.10.e46

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  14 in total

1.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals.

Authors:  P D Zamore; T Tuschl; P A Sharp; D P Bartel
Journal:  Cell       Date:  2000-03-31       Impact factor: 41.582

Review 3.  Gene silencing by double-stranded RNA.

Authors:  R W Carthew
Journal:  Curr Opin Cell Biol       Date:  2001-04       Impact factor: 8.382

4.  Tsg101 and the vacuolar protein sorting pathway are essential for HIV-1 budding.

Authors:  J E Garrus; U K von Schwedler; O W Pornillos; S G Morham; K H Zavitz; H E Wang; D A Wettstein; K M Stray; M Côté; R L Rich; D G Myszka; W I Sundquist
Journal:  Cell       Date:  2001-10-05       Impact factor: 41.582

5.  The Hsp90 chaperone complex is both a facilitator and a repressor of the dsRNA-dependent kinase PKR.

Authors:  O Donzé; T Abbas-Terki; D Picard
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

Review 6.  PKR; a sentinel kinase for cellular stress.

Authors:  B R Williams
Journal:  Oncogene       Date:  1999-11-01       Impact factor: 9.867

7.  Role for a bidentate ribonuclease in the initiation step of RNA interference.

Authors:  E Bernstein; A A Caudy; S M Hammond; G J Hannon
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

8.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.

Authors:  S M Elbashir; J Harborth; W Lendeckel; A Yalcin; K Weber; T Tuschl
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

9.  Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems.

Authors:  N J Caplen; S Parrish; F Imani; A Fire; R A Morgan
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

10.  Hsp90 binds and regulates Gcn2, the ligand-inducible kinase of the alpha subunit of eukaryotic translation initiation factor 2 [corrected].

Authors:  O Donzé; D Picard
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

View more
  63 in total

Review 1.  RNA interference: biology, mechanism, and applications.

Authors:  Neema Agrawal; P V N Dasaradhi; Asif Mohmmed; Pawan Malhotra; Raj K Bhatnagar; Sunil K Mukherjee
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

2.  High-throughput selection of effective RNAi probes for gene silencing.

Authors:  Rajeev Kumar; Douglas S Conklin; Vivek Mittal
Journal:  Genome Res       Date:  2003-10       Impact factor: 9.043

3.  A simple and cost-effective method for producing small interfering RNAs with high efficacy.

Authors:  Muhammad Sohail; Graeme Doran; Johann Riedemann; Val Macaulay; Edwin M Southern
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

4.  Allele-specific silencing of dominant disease genes.

Authors:  Victor M Miller; Haibin Xia; Ginger L Marrs; Cynthia M Gouvion; Gloria Lee; Beverly L Davidson; Henry L Paulson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-02       Impact factor: 11.205

5.  Conditional gene knock-down by CRE-dependent short interfering RNAs.

Authors:  Lauriane Fritsch; Luis A Martinez; Redha Sekhri; Irina Naguibneva; Mathieu Gérard; Marie Vandromme; Laurent Schaeffer; Annick Harel-Bellan
Journal:  EMBO Rep       Date:  2004-01-09       Impact factor: 8.807

6.  TROD: T7 RNAi Oligo Designer.

Authors:  Peter Dudek; Didier Picard
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

7.  Can RNA interference be used to expand the plasticity of autologous adult stem cells?

Authors:  Boon Chin Heng; Tong Cao
Journal:  J Mol Med (Berl)       Date:  2004-09-14       Impact factor: 4.599

8.  Lentiviral-mediated knock-down of GD3 synthase protects against MPTP-induced motor deficits and neurodegeneration.

Authors:  Anandh Dhanushkodi; Yi Xue; Emily E Roguski; Yun Ding; Shannon G Matta; Detlef Heck; Guo-Huang Fan; Michael P McDonald
Journal:  Neurosci Lett       Date:  2018-11-01       Impact factor: 3.046

Review 9.  RNA interference: the molecular immune system.

Authors:  Omar Bagasra; Kiley R Prilliman
Journal:  J Mol Histol       Date:  2004-08       Impact factor: 2.611

10.  Sequence characteristics of functional siRNAs.

Authors:  Bernd Jagla; Nathalie Aulner; Peter D Kelly; Da Song; Allen Volchuk; Andrzej Zatorski; David Shum; Thomas Mayer; Dino A De Angelis; Ouathek Ouerfelli; Urs Rutishauser; James E Rothman
Journal:  RNA       Date:  2005-06       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.