Literature DB >> 11996541

Nonlinear signal analysis methods in the elucidation of protein sequence-structure relationships.

Alessandro Giuliani1, Romualdo Benigni, Joseph P Zbilut, Charles L Webber, Paolo Sirabella, Alfredo Colosimo.   

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Year:  2002        PMID： 11996541     DOI： 10.1021/cr0101499

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


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  13 in total

1.  Protein aggregation/folding: the role of deterministic singularities of sequence hydrophobicity as determined by nonlinear signal analysis of acylphosphatase and Abeta(1-40).

Authors:  Joseph P Zbilut; Alfredo Colosimo; Filippo Conti; Mauro Colafranceschi; Cesare Manetti; MariaCristina Valerio; Charles L Webber; Alessandro Giuliani
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Designing human m1 muscarinic receptor-targeted hydrophobic eigenmode matched peptides as functional modulators.

Authors:  Karen A Selz; Arnold J Mandell; Michael F Shlesinger; Vani Arcuragi; Michael J Owens
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

3.  Global characteristics of protein sequences and their implications.

Authors:  S Rackovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-26       Impact factor: 11.205

4.  Wavelet Analysis of Protein Motion.

Authors:  Noah C Benson; Valerie Daggett
Journal:  Int J Wavelets Multiresolut Inf Process       Date:  2012-07       Impact factor: 1.408

5.  Symmetric key structural residues in symmetric proteins with beta-trefoil fold.

Authors:  Jianhui Feng; Mingfeng Li; Yanzhao Huang; Yi Xiao
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

6.  Pattern similarity study of functional sites in protein sequences: lysozymes and cystatins.

Authors:  Shuryo Nakai; Eunice C Y Li-Chan; Jinglie Dou
Journal:  BMC Biochem       Date:  2005-05-18       Impact factor: 4.059

7.  A computational approach identifies two regions of Hepatitis C Virus E1 protein as interacting domains involved in viral fusion process.

Authors:  Roberto Bruni; Angela Costantino; Elena Tritarelli; Cinzia Marcantonio; Massimo Ciccozzi; Maria Rapicetta; Gamal El Sawaf; Alessandro Giuliani; Anna Rita Ciccaglione
Journal:  BMC Struct Biol       Date:  2009-07-29

8.  An ensemble method for predicting subnuclear localizations from primary protein structures.

Authors:  Guo Sheng Han; Zu Guo Yu; Vo Anh; Anaththa P D Krishnajith; Yu-Chu Tian
Journal:  PLoS One       Date:  2013-02-27       Impact factor: 3.240

9.  Using THz Spectroscopy, Evolutionary Network Analysis Methods, and MD Simulation to Map the Evolution of Allosteric Communication Pathways in c-Type Lysozymes.

Authors:  Kristina N Woods; Juergen Pfeffer
Journal:  Mol Biol Evol       Date:  2015-09-03       Impact factor: 16.240

Review 10.  Visualizing time-related data in biology, a review.

Authors:  Maria Secrier; Reinhard Schneider
Journal:  Brief Bioinform       Date:  2013-04-12       Impact factor: 11.622
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