Literature DB >> 11988179

Viral ion channels: structure and function.

Wolfgang B Fischer1, Mark S P Sansom.   

Abstract

Viral ion channels are short auxiliary membrane proteins with a length of ca. 100 amino acids. They are found in enveloped viruses from influenza A, influenza B and influenza C (Orthomyxoviridae), and the human immunodeficiency virus type 1 (HIV-1, Retroviridae). The channels are called M2 (influenza A), NB (influenza B), CM2 (influenza C) and Vpu (HIV-1). Recently, in Paramecium bursaria chlorella virus (PBCV-1, Phycodnaviridae), a K+ selective ion channel has been discovered. The viral channels form homo oligomers to allow an ion flux and represent miniaturised systems. Proton conductivity of M2 is established; NB, Vpu and the potassium channel from PBC-1 conduct ions; for CM2 ion conductivity is still under proof. This review summarises the current knowledge of these short viral membrane proteins. Their discovery is outlined and experimental evidence for their structure and function is discussed. Studies using computational methods are presented as well as investigations of drug-protein interactions.

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Year:  2002        PMID: 11988179     DOI: 10.1016/s0304-4157(01)00009-0

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  58 in total

1.  Molecular dynamics simulations on the first two helices of Vpu from HIV-1.

Authors:  I Sramala; V Lemaitre; J D Faraldo-Gómez; S Vincent; A Watts; W B Fischer
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

Review 2.  Structures of membrane proteins.

Authors:  Kutti R Vinothkumar; Richard Henderson
Journal:  Q Rev Biophys       Date:  2010-02       Impact factor: 5.318

Review 3.  Ion channels as antivirus targets.

Authors:  Xin Liang; Zhi-Yuan Li
Journal:  Virol Sin       Date:  2010-07-28       Impact factor: 4.327

Review 4.  Comparative NMR studies demonstrate profound differences between two viroporins: p7 of HCV and Vpu of HIV-1.

Authors:  Gabriel A Cook; Hua Zhang; Sang Ho Park; Yan Wang; Stanley J Opella
Journal:  Biochim Biophys Acta       Date:  2010-08-18

Review 5.  The human T-cell leukemia virus type 1 p13II protein: effects on mitochondrial function and cell growth.

Authors:  D M D'Agostino; M Silic-Benussi; H Hiraragi; M D Lairmore; V Ciminale
Journal:  Cell Death Differ       Date:  2005-08       Impact factor: 15.828

6.  The entry mechanism of membrane-containing phage Bam35 infecting Bacillus thuringiensis.

Authors:  Ausra Gaidelyte; Virginija Cvirkaite-Krupovic; Rimantas Daugelavicius; Jaana K H Bamford; Dennis H Bamford
Journal:  J Bacteriol       Date:  2006-08       Impact factor: 3.490

7.  Membrane assembly of simple helix homo-oligomers studied via molecular dynamics simulations.

Authors:  Lintao Bu; Wonpil Im; Charles L Brooks
Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

Review 8.  Ion channels in microbes.

Authors:  Boris Martinac; Yoshiro Saimi; Ching Kung
Journal:  Physiol Rev       Date:  2008-10       Impact factor: 37.312

9.  Conformational changes induced by a single amino acid substitution in the trans-membrane domain of Vpu: implications for HIV-1 susceptibility to channel blocking drugs.

Authors:  Sang Ho Park; Stanley J Opella
Journal:  Protein Sci       Date:  2007-08-31       Impact factor: 6.725

10.  HIV-1 infection induces interleukin-1β production via TLR8 protein-dependent and NLRP3 inflammasome mechanisms in human monocytes.

Authors:  Haitao Guo; Jianmei Gao; Debra J Taxman; Jenny P Y Ting; Lishan Su
Journal:  J Biol Chem       Date:  2014-06-17       Impact factor: 5.157

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