Literature DB >> 11986399

Fluorescence PCR quantification of cyclin D1 expression.

Kojo S J Elenitoba-Johnson1, Sandra D Bohling, Stephen D Jenson, Zhaosheng Lin, Kimberly A Monnin, Megan S Lim.   

Abstract

We have used a continuous fluorescence monitoring method to assess cyclin D1 mRNA expression in a variety of hematological and non-hematological processes. We examined 14 cell lines, 11 reactive lymphoid tissues, and 57 primary hematopoietic neoplasms including mantle cell lymphoma (MCL) (n = 10), chronic lymphocytic leukemia/small lymphocytic lymphoma (CLL/SLL) (n = 11), acute lymphoblastic leukemia/lymphoma (n = 15), follicular lymphoma (n = 6), peripheral T-cell lymphoma (PTCL) (n = 3), anaplastic large cell lymphoma (n = 3), hairy cell leukemia (n = 3), Burkitt lymphoma (n = 1), Burkitt-like lymphoma (n = 4), and plasmacytoma (n = 1) for the expression of cyclin D1 mRNA using fluorescently labeled sequence-specific hybridization probes. Fluorescence (F) was plotted against cycle (C) number over 45 cycles. The log-linear portion of the F versus C graph identified a fractional cycle number for threshold fluorescence. A beta-globin mRNA transcript with equivalent amplification efficiency to that of cyclin D1 was used for assessment of RNA integrity and normalization. In general, the MCLs demonstrated substantially higher levels of cyclin D1 mRNA than the other lymphoproliferative processes. Moderately high levels of cyclin D1 mRNA were detected in one PTCL. On average, the CLL/SLL cases showed cyclin D1 mRNA levels two to three orders of magnitude lower than observed in the MCLs. Cell lines derived from non-hematopoietic neoplasms such as fibrosarcoma, small cell carcinoma, and neuroblastoma showed comparable or higher levels of cyclin D1 mRNA than the MCLs. Our results indicate that quantitative real-time reverse transcription (RT) polymerase chain reaction is a simple, rapid, and accurate technique for assessing cyclin D1 expression, and while it is not specific, it can reliably be used in the distinction of MCL from CLL/SLL.

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Year:  2002        PMID: 11986399      PMCID: PMC1906992          DOI: 10.1016/S1525-1578(10)60686-1

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  29 in total

1.  Mantle cell lymphoma. A proposal for unification of morphologic, immunologic, and molecular data.

Authors:  P M Banks; J Chan; M L Cleary; G Delsol; C De Wolf-Peeters; K Gatter; T M Grogan; N L Harris; P G Isaacson; E S Jaffe
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Review 2.  Quantitative or semi-quantitative PCR: reality versus myth.

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Journal:  PCR Methods Appl       Date:  1992-08

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Authors:  M Clementi; S Menzo; P Bagnarelli; A Manzin; A Valenza; P E Varaldo
Journal:  PCR Methods Appl       Date:  1993-02

4.  Kinetic PCR analysis: real-time monitoring of DNA amplification reactions.

Authors:  R Higuchi; C Fockler; G Dollinger; R Watson
Journal:  Biotechnology (N Y)       Date:  1993-09

5.  Clustering of breakpoints on chromosome 11 in human B-cell neoplasms with the t(11;14) chromosome translocation.

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Journal:  Nature       Date:  1985 May 23-29       Impact factor: 49.962

6.  PRAD-1/cyclin D1 gene overexpression in chronic lymphoproliferative disorders: a highly specific marker of mantle cell lymphoma.

Authors:  F Bosch; P Jares; E Campo; A Lopez-Guillermo; M A Piris; N Villamor; D Tassies; E S Jaffe; E Montserrat; C Rozman
Journal:  Blood       Date:  1994-10-15       Impact factor: 22.113

7.  Polymerase chain reaction detection of the t(11;14) translocation involving the bcl-1 major translocation cluster in mantle cell lymphoma.

Authors:  R Luthra; S Hai; W C Pugh
Journal:  Diagn Mol Pathol       Date:  1995-03

8.  Simultaneous amplification and detection of specific DNA sequences.

Authors:  R Higuchi; G Dollinger; P S Walsh; R Griffith
Journal:  Biotechnology (N Y)       Date:  1992-04

Review 9.  A revised European-American classification of lymphoid neoplasms: a proposal from the International Lymphoma Study Group.

Authors:  N L Harris; E S Jaffe; H Stein; P M Banks; J K Chan; M L Cleary; G Delsol; C De Wolf-Peeters; B Falini; K C Gatter
Journal:  Blood       Date:  1994-09-01       Impact factor: 22.113

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Authors:  A M Wang; M V Doyle; D F Mark
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

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  4 in total

1.  Validation of cDNA microarray gene expression data obtained from linearly amplified RNA.

Authors:  S D Jenson; R S Robetorye; S D Bohling; J A Schumacher; J W Morgan; M S Lim; K S J Elenitoba-Johnson
Journal:  Mol Pathol       Date:  2003-12

2.  Microarray analysis of B-cell lymphoma cell lines with the t(14;18).

Authors:  Ryan S Robetorye; Sandra D Bohling; John W Morgan; G Chris Fillmore; Megan S Lim; Kojo S J Elenitoba-Johnson
Journal:  J Mol Diagn       Date:  2002-08       Impact factor: 5.568

3.  P38 mitogen activated protein kinase expression and regulation by interleukin-4 in human B cell non-Hodgkin lymphomas.

Authors:  Hu Ding; Ali M Gabali; Stephen D Jenson; Megan S Lim; Kojo S J Elenitoba-Johnson
Journal:  J Hematop       Date:  2009-10-21       Impact factor: 0.196

4.  Cyclin D1 expression in peripheral T-cell lymphomas.

Authors:  Joo Y Song; Liping Song; Alex F Herrera; Girish Venkataraman; Joyce L Murata-Collins; Victoria H Bedell; Yuan Yuan Chen; Young S Kim; Reda Tadros; Bharat N Nathwani; Dennis D Weisenburger; Andrew L Feldman
Journal:  Mod Pathol       Date:  2016-07-29       Impact factor: 7.842

  4 in total

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