Literature DB >> 11976141

Genomic sequence and evolution of marine cyanophage P60: a new insight on lytic and lysogenic phages.

Feng Chen1, Jingrang Lu.   

Abstract

The genome of cyanophage P60, a lytic virus which infects marine Synechococcus WH7803, was completely sequenced. The P60 genome contained 47,872 bp with 80 potential open reading frames that were mostly similar to the genes found in lytic phages like T7, phi-YeO3-12, and SIO1. The DNA replication system, consisting of primase-helicase and DNA polymerase, appeared to be more conserved in podoviruses than in siphoviruses and myoviruses, suggesting that DNA replication genes could be the critical elements for lytic phages. Strikingly high sequence similarities in the regions coding for nucleotide metabolism were found between cyanophage P60 and marine unicellular cyanobacteria.

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Year:  2002        PMID: 11976141      PMCID: PMC127578          DOI: 10.1128/AEM.68.5.2589-2594.2002

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  31 in total

Review 1.  Acute and persistent viral life strategies and their relationship to emerging diseases.

Authors:  L P Villarreal; V R Defilippis; K A Gottlieb
Journal:  Virology       Date:  2000-06-20       Impact factor: 3.616

2.  Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater.

Authors:  J B Waterbury; F W Valois
Journal:  Appl Environ Microbiol       Date:  1993-10       Impact factor: 4.792

3.  Gene transfer by transduction in the marine environment.

Authors:  S C Jiang; J H Paul
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

4.  Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes.

Authors:  F Chen; C A Suttle; S M Short
Journal:  Appl Environ Microbiol       Date:  1996-08       Impact factor: 4.792

5.  Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes.

Authors:  F Chen; C A Suttle
Journal:  Virology       Date:  1996-05-01       Impact factor: 3.616

6.  Occurrence of a sequence in marine cyanophages similar to that of T4 g20 and its application to PCR-based detection and quantification techniques.

Authors:  N J Fuller; W H Wilson; I R Joint; N H Mann
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

7.  Significance of Lysogeny in the Marine Environment: Studies with Isolates and a Model of Lysogenic Phage Production

Authors: 
Journal:  Microb Ecol       Date:  1998-05       Impact factor: 4.552

8.  High abundance of viruses found in aquatic environments.

Authors:  O Bergh; K Y Børsheim; G Bratbak; M Heldal
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

9.  The complete genome sequence of the Streptomyces temperate phage straight phiC31: evolutionary relationships to other viruses.

Authors:  M C Smith; R N Burns; S E Wilson; M A Gregory
Journal:  Nucleic Acids Res       Date:  1999-05-15       Impact factor: 16.971

10.  Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.

Authors:  J J Dunn; F W Studier
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

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  62 in total

1.  Genomic analysis of uncultured marine viral communities.

Authors:  Mya Breitbart; Peter Salamon; Bjarne Andresen; Joseph M Mahaffy; Anca M Segall; David Mead; Farooq Azam; Forest Rohwer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-16       Impact factor: 11.205

Review 2.  Phage-host interaction: an ecological perspective.

Authors:  Sandra Chibani-Chennoufi; Anne Bruttin; Marie-Lise Dillmann; Harald Brüssow
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

3.  Transfer of photosynthesis genes to and from Prochlorococcus viruses.

Authors:  Debbie Lindell; Matthew B Sullivan; Zackary I Johnson; Andrew C Tolonen; Forest Rohwer; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-15       Impact factor: 11.205

4.  Genetic organization of the psbAD region in phages infecting marine Synechococcus strains.

Authors:  Andrew Millard; Martha R J Clokie; David A Shub; Nicholas H Mann
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-19       Impact factor: 11.205

5.  The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains.

Authors:  Nicholas H Mann; Martha R J Clokie; Andrew Millard; Annabel Cook; William H Wilson; Peter J Wheatley; Andrey Letarov; H M Krisch
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

6.  Seasonal variations in virus-host populations in Norwegian coastal waters: focusing on the cyanophage community infecting marine Synechococcus spp.

Authors:  Ruth-Anne Sandaa; Aud Larsen
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

7.  Complete genome sequence of phiHSIC, a pseudotemperate marine phage of Listonella pelagia.

Authors:  John H Paul; Shannon J Williamson; Amy Long; R Nathan Authement; David John; Anca M Segall; Forest L Rohwer; Matthew Androlewicz; Stacey Patterson
Journal:  Appl Environ Microbiol       Date:  2005-06       Impact factor: 4.792

8.  Identification of a diagnostic marker to detect freshwater cyanophages of filamentous cyanobacteria.

Authors:  Andrea C Baker; Victoria J Goddard; Joanne Davy; Declan C Schroeder; David G Adams; William H Wilson
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

9.  The genome of bacteriophage K1F, a T7-like phage that has acquired the ability to replicate on K1 strains of Escherichia coli.

Authors:  Dean Scholl; Carl Merril
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

10.  Genomic analysis of bacteriophage PhiJL001: insights into its interaction with a sponge-associated alpha-proteobacterium.

Authors:  Jayme E Lohr; Feng Chen; Russell T Hill
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

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