Literature DB >> 11970488

Extended Eden model reproduces growth of an acellular slime mold.

G Wagner1, R Halvorsrud, P Meakin.   

Abstract

A stochastic growth model was used to simulate the growth of the acellular slime mold Physarum polycephalum on substrates where the nutrients were confined in separate drops. Growth of Physarum on such substrates was previously studied experimentally and found to produce a range of different growth patterns [Phys. Rev. E 57, 941 (1998)]. The model represented the aging of cluster sites and differed from the original Eden model in that the occupation probability of perimeter sites depended on the time of occupation of adjacent cluster sites. This feature led to a bias in the selection of growth directions. A moderate degree of persistence was found to be crucial to reproduce the biological growth patterns under various conditions. Persistence in growth combined quick propagation in heterogeneous environments with a high probability of locating sources of nutrients.

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Year:  1999        PMID: 11970488     DOI: 10.1103/physreve.60.5879

Source DB:  PubMed          Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics        ISSN: 1063-651X


  2 in total

1.  Solid phase DNA amplification: a simple Monte Carlo Lattice model.

Authors:  Jean-Francois Mercier; Gary W Slater; Pascal Mayer
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

Review 2.  The fractal architecture of cytoplasmic organization: scaling, kinetics and emergence in metabolic networks.

Authors:  Miguel Antonio Aon; Brian O'Rourke; Sonia Cortassa
Journal:  Mol Cell Biochem       Date:  2004 Jan-Feb       Impact factor: 3.396

  2 in total

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