| Literature DB >> 11970130 |
P Garstecki1, T X Hoang, M Cieplak.
Abstract
Dynamical connectivity graphs, which describe dynamical transition rates between local energy minima of a system, can be displayed against the background of a disconnectivity graph which represents the energy landscape of the system. The resulting supergraph describes both dynamics and statics of the system in a unified coarse-grained sense. We give examples of the supergraphs for several two-dimensional spin and protein-related systems. We demonstrate that disordered ferromagnets have supergraphs akin to those of model proteins whereas spin glasses behave like random sequences of amino acids that fold badly.Entities:
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Year: 1999 PMID: 11970130 DOI: 10.1103/physreve.60.3219
Source DB: PubMed Journal: Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics ISSN: 1063-651X