Literature DB >> 11964235

Implications of threonine hydrogen bonding in the glycophorin A transmembrane helix dimer.

Steven O Smith1, Markus Eilers, David Song, Evan Crocker, Weiwen Ying, Michel Groesbeek, Guenter Metz, Martine Ziliox, Saburo Aimoto.   

Abstract

The transmembrane helix of glycophorin A contains a seven-residue motif, LIxxGVxxGVxxT, that mediates protein dimerization. Threonine is the only polar amino acid in this motif with the potential to stabilize the dimer through hydrogen-bonding interactions. Polarized Fourier transform infrared spectroscopy is used to establish a robust protocol for incorporating glycophorin A transmembrane peptides into membrane bilayers. Analysis of the dichroic ratio of the 1655-cm(-1) amide I vibration indicates that peptides reconstituted by detergent dialysis have a transmembrane orientation with a helix crossing angle of <35 degrees. Solid-state nuclear magnetic resonance spectroscopy is used to establish high resolution structural restraints on the conformation and packing of Thr-87 in the dimer interface. Rotational resonance measurement of a 2.9-A distance between the gamma-methyl and backbone carbonyl carbons of Thr-87 is consistent with a gauche- conformation for the chi1 torsion angle. Rotational-echo double-resonance measurements demonstrate close packing (4.0 +/- 0.2 A) of the Thr-87 gamma-methyl group with the backbone nitrogen of Ile-88 across the dimer interface. The short interhelical distance places the beta-hydroxyl of Thr-87 within hydrogen-bonding range of the backbone carbonyl of Val-84 on the opposing helix. These results refine the structure of the glycophorin A dimer in membrane bilayers and highlight the complementary role of small and polar residues in the tight association of transmembrane helices in membrane proteins.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11964235      PMCID: PMC1302037          DOI: 10.1016/S0006-3495(02)75590-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  36 in total

1.  Determination of molecular order in supported lipid membranes by internal reflection Fourier transform infrared spectroscopy.

Authors:  M J Citra; P H Axelsen
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

2.  Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching.

Authors:  P D Adams; D M Engelman; A T Brünger
Journal:  Proteins       Date:  1996-11

3.  Polarized infrared absorption of Na+/K+-ATPase studied by attenuated total reflection spectroscopy.

Authors:  U P Fringeli; H J Apell; M Fringeli; P Läuger
Journal:  Biochim Biophys Acta       Date:  1989-09-18

4.  Structure and orientation of the transmembrane domain of glycophorin A in lipid bilayers.

Authors:  S O Smith; R Jonas; M Braiman; B J Bormann
Journal:  Biochemistry       Date:  1994-05-24       Impact factor: 3.162

5.  The infrared dichroism of transmembrane helical polypeptides.

Authors:  P H Axelsen; B K Kaufman; R N McElhaney; R N Lewis
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

6.  Determination of helix-helix interactions in membranes by rotational resonance NMR.

Authors:  S O Smith; B J Bormann
Journal:  Proc Natl Acad Sci U S A       Date:  1995-01-17       Impact factor: 11.205

7.  Orientation of functional and nonfunctional PTS permease signal sequences in lipid bilayers. A polarized attenuated total reflection infrared study.

Authors:  L K Tamm; S A Tatulian
Journal:  Biochemistry       Date:  1993-08-03       Impact factor: 3.162

Review 8.  Specificity and promiscuity in membrane helix interactions.

Authors:  M A Lemmon; D M Engelman
Journal:  Q Rev Biophys       Date:  1994-05       Impact factor: 5.318

9.  Glycophorin A dimerization is driven by specific interactions between transmembrane alpha-helices.

Authors:  M A Lemmon; J M Flanagan; J F Hunt; B D Adair; B J Bormann; C E Dempsey; D M Engelman
Journal:  J Biol Chem       Date:  1992-04-15       Impact factor: 5.157

10.  Electron-crystallographic refinement of the structure of bacteriorhodopsin.

Authors:  N Grigorieff; T A Ceska; K H Downing; J M Baldwin; R Henderson
Journal:  J Mol Biol       Date:  1996-06-14       Impact factor: 5.469

View more
  37 in total

Review 1.  How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles.

Authors:  William F DeGrado; Holly Gratkowski; James D Lear
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

Review 2.  Structure elucidation of dimeric transmembrane domains of bitopic proteins.

Authors:  Eduard V Bocharov; Pavel E Volynsky; Konstantin V Pavlov; Roman G Efremov; Alexander S Arseniev
Journal:  Cell Adh Migr       Date:  2010-05-01       Impact factor: 3.405

3.  Method to measure strong protein-protein interactions in lipid bilayers using a steric trap.

Authors:  Heedeok Hong; Tracy M Blois; Zheng Cao; James U Bowie
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

4.  Rotational orientation of monomers within a designed homo-oligomer transmembrane helical bundle.

Authors:  Kathleen P Howard; Wei Liu; Evan Crocker; Vikas Nanda; James Lear; William F Degrado; Steven O Smith
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

5.  Helix packing and orientation in the transmembrane dimer of gp55-P of the spleen focus forming virus.

Authors:  Wei Liu; Evan Crocker; Stefan N Constantinescu; Steven O Smith
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

6.  Orientation and dynamics of synthetic transbilayer polypeptides containing GpATM dimerization motifs.

Authors:  Mark C McDonald; Valerie Booth; Michael R Morrow
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

7.  Changes in apparent free energy of helix-helix dimerization in a biological membrane due to point mutations.

Authors:  Mylinh T Duong; Todd M Jaszewski; Karen G Fleming; Kevin R MacKenzie
Journal:  J Mol Biol       Date:  2007-05-18       Impact factor: 5.469

8.  Structural constraints on the transmembrane and juxtamembrane regions of the phospholamban pentamer in membrane bilayers: Gln29 and Leu52.

Authors:  Wei Liu; Jeffrey Z Fei; Toru Kawakami; Steven O Smith
Journal:  Biochim Biophys Acta       Date:  2007-10-22

9.  Mutational analysis of threonine 402 adjacent to the GXXXG dimerization motif in transmembrane segment 1 of ABCG2.

Authors:  Orsolya Polgar; Caterina Ierano; Akina Tamaki; Bradford Stanley; Yvona Ward; Di Xia; Nadya Tarasova; Robert W Robey; Susan E Bates
Journal:  Biochemistry       Date:  2010-03-16       Impact factor: 3.162

10.  Conformational changes induced by the A21G Flemish mutation in the amyloid precursor protein lead to increased Aβ production.

Authors:  Tzu-Chun Tang; Yi Hu; Pascal Kienlen-Campard; Laetitia El Haylani; Marie Decock; Joanne Van Hees; Ziao Fu; Jean-Noel Octave; Stefan N Constantinescu; Steven O Smith
Journal:  Structure       Date:  2014-01-23       Impact factor: 5.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.