Literature DB >> 11959921

Genetic complementation in apicomplexan parasites.

Boris Striepen1, Michael W White, Catherine Li, Michael N Guerini, S-Banoo Malik, John M Logsdon, Chang Liu, Mitchell S Abrahamsen.   

Abstract

A robust forward genetic model for Apicomplexa could greatly enhance functional analysis of genes in these important protozoan pathogens. We have developed and successfully tested a genetic complementation strategy based on genomic insertion in Toxoplasma gondii. Adapting recombination cloning to genomic DNA, we show that complementing sequences can be shuttled between parasite genome and bacterial plasmid, providing an efficient tool for the recovery and functional assessment of candidate genes. We show complementation, gene cloning, and biological verification with a mutant parasite lacking hypoxanthine-xanthine-guanine phosphoribosyltransferase and a T. gondii cDNA library. We also explored the utility of this approach to clone genes based on function from other apicomplexan parasites using Toxoplasma as a surrogate. A heterologous library containing Cryptosporidium parvum genomic DNA was generated, and we identified a C. parvum gene coding for inosine 5-monophosphate-dehydrogenase (IMPDH). Interestingly, phylogenetic analysis demonstrates a clear eubacterial origin of this gene and strongly suggests its lateral transfer from epsilon-proteobacteria. The prokaryotic origin of this enzyme might make it a promising target for therapeutics directed against Cryptosporidium.

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Year:  2002        PMID: 11959921      PMCID: PMC122944          DOI: 10.1073/pnas.092525699

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  MRBAYES: Bayesian inference of phylogenetic trees.

Authors:  J P Huelsenbeck; F Ronquist
Journal:  Bioinformatics       Date:  2001-08       Impact factor: 6.937

Review 2.  Parasite genomics: current status and future prospects.

Authors:  R L Tarleton; J Kissinger
Journal:  Curr Opin Immunol       Date:  2001-08       Impact factor: 7.486

3.  Genomics. Are there bugs in our genome?

Authors:  J O Andersson; W F Doolittle; C L Nesbø
Journal:  Science       Date:  2001-05-17       Impact factor: 47.728

4.  Toxoplasma gondii: characterization of temperature-sensitive tachyzoite cell cycle mutants.

Authors:  J R Radke; M N Guerini; M W White
Journal:  Exp Parasitol       Date:  2000-11       Impact factor: 2.011

5.  Toxoplasma gondii: characterization of a mutant resistant to 5-fluorodeoxyuridine.

Authors:  E R Pfefferkorn; L C Pfefferkorn
Journal:  Exp Parasitol       Date:  1977-06       Impact factor: 2.011

6.  The rapid generation of mutation data matrices from protein sequences.

Authors:  D T Jones; W R Taylor; J M Thornton
Journal:  Comput Appl Biosci       Date:  1992-06

7.  Toxoplasma gondii: isolation and preliminary characterization of temperature-sensitive mutants.

Authors:  E R Pfefferkorn; L C Pfefferkorn
Journal:  Exp Parasitol       Date:  1976-06       Impact factor: 2.011

8.  PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished).

Authors:  Amit Bahl; Brian Brunk; Ross L Coppel; Jonathan Crabtree; Sharon J Diskin; Martin J Fraunholz; Gregory R Grant; Dinesh Gupta; Robert L Huestis; Jessica C Kissinger; Philip Labo; Li Li; Shannon K McWeeney; Arthur J Milgram; David S Roos; Jonathan Schug; Christian J Stoeckert
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

9.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

10.  Arabinosyl nucleosides inhibit Toxoplasma gondii and allow the selection of resistant mutants.

Authors:  E R Pfefferkorn; L C Pfefferkorn
Journal:  J Parasitol       Date:  1976-12       Impact factor: 1.276

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  46 in total

Review 1.  How big is the iceberg of which organellar genes in nuclear genomes are but the tip?

Authors:  W F Doolittle; Y Boucher; C L Nesbø; C J Douady; J O Andersson; A J Roger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

2.  Intron gain and loss in the evolution of the conserved eukaryotic recombination machinery.

Authors:  Frank Hartung; Frank R Blattner; Holger Puchta
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

Review 3.  The antibiotic potential of prokaryotic IMP dehydrogenase inhibitors.

Authors:  L Hedstrom; G Liechti; J B Goldberg; D R Gollapalli
Journal:  Curr Med Chem       Date:  2011       Impact factor: 4.530

4.  High-throughput growth assay for Toxoplasma gondii using yellow fluorescent protein.

Authors:  Marc-Jan Gubbels; Catherine Li; Boris Striepen
Journal:  Antimicrob Agents Chemother       Date:  2003-01       Impact factor: 5.191

5.  A small-molecule approach to studying invasive mechanisms of Toxoplasma gondii.

Authors:  Kimberly L Carey; Nicholas J Westwood; Timothy J Mitchison; Gary E Ward
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

Review 6.  Toxoplasma gondii: the model apicomplexan.

Authors:  Kami Kim; Louis M Weiss
Journal:  Int J Parasitol       Date:  2004-03-09       Impact factor: 3.981

7.  The state of research for AIDS-associated opportunistic infections and the importance of sustaining smaller research communities.

Authors:  Anthony P Sinai; Edna S Kaneshiro; Honorine Ward; Louis M Weiss; Melanie T Cushion
Journal:  Eukaryot Cell       Date:  2011-12-09

8.  Overexpression of a cytosolic pyrophosphatase (TgPPase) reveals a regulatory role of PP(i) in glycolysis for Toxoplasma gondii.

Authors:  Douglas A Pace; Jianmin Fang; Roxana Cintron; Melissa D Docampo; Silvia N J Moreno
Journal:  Biochem J       Date:  2011-12-01       Impact factor: 3.857

9.  Phthalazinone inhibitors of inosine-5'-monophosphate dehydrogenase from Cryptosporidium parvum.

Authors:  Corey R Johnson; Suresh Kumar Gorla; Mandapati Kavitha; Minjia Zhang; Xiaoping Liu; Boris Striepen; Jan R Mead; Gregory D Cuny; Lizbeth Hedstrom
Journal:  Bioorg Med Chem Lett       Date:  2012-12-27       Impact factor: 2.823

10.  Expression of the essential Kinase PfCDPK1 from Plasmodium falciparum in Toxoplasma gondii facilitates the discovery of novel antimalarial drugs.

Authors:  Rajshekhar Y Gaji; Lisa Checkley; Michael L Reese; Michael T Ferdig; Gustavo Arrizabalaga
Journal:  Antimicrob Agents Chemother       Date:  2014-02-18       Impact factor: 5.191

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