Literature DB >> 11959542

Biosynthetic gene cluster of simocyclinone, a natural multihybrid antibiotic.

A Trefzer1, S Pelzer, J Schimana, S Stockert, C Bihlmaier, H-P Fiedler, K Welzel, A Vente, A Bechthold.   

Abstract

The entire simocyclinone biosynthetic cluster (sim gene cluster) from the producer Streptomyces antibioticus Tü6040 was identified on six overlapping cosmids (1N1, 5J10, 2L16, 2P6, 4G22, and 1K3). In total, 80.7 kb of DNA from these cosmids was sequenced, and the analysis revealed 49 complete open reading frames (ORFs). These ORFs include genes responsible for the formation and attachment of four different moieties originating from at least three different pools of primary metabolites. Also in the sim gene cluster, four ORFs were detected that resemble putative regulatory and export functions. Based on the putative function of the gene products, a model for simocyclinone D8 biosynthesis was proposed. Biosynthetic mutants were generated by insertional gene inactivation experiments, and culture extracts of these mutants were analyzed by high-performance liquid chromatography. Production of simocyclinone D8 was clearly detectable in the wild-type strain but was not detectable in the mutant strains. This indicated that indeed the sim gene cluster had been cloned.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11959542      PMCID: PMC127163          DOI: 10.1128/AAC.46.5.1174-1182.2002

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  57 in total

1.  Isolation and characterization of the epothilone biosynthetic gene cluster from Sorangium cellulosum.

Authors:  B Julien; S Shah; R Ziermann; R Goldman; L Katz; C Khosla
Journal:  Gene       Date:  2000-05-16       Impact factor: 3.688

2.  Two new tailoring enzymes, a glycosyltransferase and an oxygenase, involved in biosynthesis of the angucycline antibiotic urdamycin A in Streptomyces fradiae Tü2717.

Authors:  B Faust; D Hoffmeister; G Weitnauer; L Westrich; S Haag; P Schneider; H Decker; E Künzel; J Rohr; A Bechthold
Journal:  Microbiology       Date:  2000-01       Impact factor: 2.777

3.  Identification of the novobiocin biosynthetic gene cluster of Streptomyces spheroides NCIB 11891.

Authors:  M Steffensky; A Mühlenweg; Z X Wang; S M Li; L Heide
Journal:  Antimicrob Agents Chemother       Date:  2000-05       Impact factor: 5.191

4.  Biosynthesis of the polyene antifungal antibiotic nystatin in Streptomyces noursei ATCC 11455: analysis of the gene cluster and deduction of the biosynthetic pathway.

Authors:  T Brautaset; O N Sekurova; H Sletta; T E Ellingsen; A R StrŁm; S Valla; S B Zotchev
Journal:  Chem Biol       Date:  2000-06

5.  Cloning, overexpression, and purification of novobiocic acid synthetase from Streptomyces spheroides NCIMB 11891.

Authors:  M Steffensky; S M Li; L Heide
Journal:  J Biol Chem       Date:  2000-07-14       Impact factor: 5.157

6.  Characterization of benzylalcohol acetyltransferases in scented and non-scented Clarkia species.

Authors:  K H Nam; N Dudareva; E Pichersky
Journal:  Plant Cell Physiol       Date:  1999-09       Impact factor: 4.927

Review 7.  Novel macrolides through genetic engineering.

Authors:  L Katz; R McDaniel
Journal:  Med Res Rev       Date:  1999-11       Impact factor: 12.944

8.  The complete genome of the hyperthermophilic bacterium Aquifex aeolicus.

Authors:  G Deckert; P V Warren; T Gaasterland; W G Young; A L Lenox; D E Graham; R Overbeek; M A Snead; M Keller; M Aujay; R Huber; R A Feldman; J M Short; G J Olsen; R V Swanson
Journal:  Nature       Date:  1998-03-26       Impact factor: 49.962

9.  The FK520 gene cluster of Streptomyces hygroscopicus var. ascomyceticus (ATCC 14891) contains genes for biosynthesis of unusual polyketide extender units.

Authors:  K Wu; L Chung; W P Revill; L Katz; C D Reeves
Journal:  Gene       Date:  2000-06-13       Impact factor: 3.688

10.  Identification of the coumermycin A(1) biosynthetic gene cluster of Streptomyces rishiriensis DSM 40489.

Authors:  Z X Wang; S M Li; L Heide
Journal:  Antimicrob Agents Chemother       Date:  2000-11       Impact factor: 5.191

View more
  37 in total

1.  Identification of the biosynthetic gene cluster for the antibiotic polyketide L-155,175 in Streptomyces hygroscopicus.

Authors:  Eun Young Kim; Jae Woo Han; Jee Yeon Lee; Beom Seok Kim
Journal:  Folia Microbiol (Praha)       Date:  2012-06-06       Impact factor: 2.099

Review 2.  Avoidance of suicide in antibiotic-producing microbes.

Authors:  Eric Cundliffe; Arnold L Demain
Journal:  J Ind Microbiol Biotechnol       Date:  2010-05-06       Impact factor: 3.346

Review 3.  The TetR family of transcriptional repressors.

Authors:  Juan L Ramos; Manuel Martínez-Bueno; Antonio J Molina-Henares; Wilson Terán; Kazuya Watanabe; Xiaodong Zhang; María Trinidad Gallegos; Richard Brennan; Raquel Tobes
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

4.  Biosynthetic gene cluster for the polyenoyltetramic acid alpha-lipomycin.

Authors:  C Bihlmaier; E Welle; C Hofmann; K Welzel; A Vente; E Breitling; M Müller; S Glaser; A Bechthold
Journal:  Antimicrob Agents Chemother       Date:  2006-06       Impact factor: 5.191

5.  The evolution of gene collectives: How natural selection drives chemical innovation.

Authors:  Michael A Fischbach; Christopher T Walsh; Jon Clardy
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

Review 6.  The TetR family of regulators.

Authors:  Leslie Cuthbertson; Justin R Nodwell
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

Review 7.  The phosphopantetheinyl transferases: catalysis of a post-translational modification crucial for life.

Authors:  Joris Beld; Eva C Sonnenschein; Christopher R Vickery; Joseph P Noel; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2014-01       Impact factor: 13.423

8.  Characterization of the TDP-D-ravidosamine biosynthetic pathway: one-pot enzymatic synthesis of TDP-D-ravidosamine from thymidine-5-phosphate and glucose-1-phosphate.

Authors:  Madan K Kharel; Hui Lian; Jürgen Rohr
Journal:  Org Biomol Chem       Date:  2011-01-24       Impact factor: 3.876

9.  Biochemical analysis of the biosynthetic pathway of an anticancer tetracycline SF2575.

Authors:  Lauren B Pickens; Woncheol Kim; Peng Wang; Hui Zhou; Kenji Watanabe; Shuichi Gomi; Yi Tang
Journal:  J Am Chem Soc       Date:  2009-12-09       Impact factor: 15.419

10.  Elucidation of oxygenation steps during oviedomycin biosynthesis and generation of derivatives with increased antitumor activity.

Authors:  Felipe Lombó; Mohamed S Abdelfattah; Alfredo F Braña; José A Salas; Jürgen Rohr; Carmen Méndez
Journal:  Chembiochem       Date:  2009-01-26       Impact factor: 3.164

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.