Literature DB >> 11959501

Transcription factor complexes.

Stephen K Burley1, Katsuhiko Kamada.   

Abstract

Considerable progress has been made during the past year on structural studies of the eukaryotic and bacterial transcription factors that control RNA polymerase function via the formation of multiprotein complexes on promoter DNA. Recently determined structures include negative cofactor 2 recognizing a preformed TATA-box-binding protein-DNA binary complex, a dimer of BmrR bound to both DNA and tetra-phenylphosphonium, DNA-bound complexes of SarA and FadR, leukemia-associated AML1-CBFbeta-DNA ternary complexes and a SAP1-SRF-DNA ternary complex.

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Year:  2002        PMID: 11959501     DOI: 10.1016/s0959-440x(02)00314-7

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  11 in total

1.  Multiple transcripts of a gene for a leucine-rich repeat receptor kinase from morning glory (Ipomoea nil) originate from different TATA boxes in a tissue-specific manner.

Authors:  C L Bassett; M L Nickerson; R E Farrell; M Harrison
Journal:  Mol Genet Genomics       Date:  2004-06-19       Impact factor: 3.291

2.  Studying multiprotein complexes by multisignal sedimentation velocity analytical ultracentrifugation.

Authors:  Andrea Balbo; Kenneth H Minor; Carlos A Velikovsky; Roy A Mariuzza; Cynthia B Peterson; Peter Schuck
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-21       Impact factor: 11.205

3.  SlWRKY45, nematode-responsive tomato WRKY gene, enhances susceptibility to the root knot nematode; M. javanica infection.

Authors:  Bharathiraja Chinnapandi; Patricia Bucki; Sigal Braun Miyara
Journal:  Plant Signal Behav       Date:  2017-12-02

4.  Desiccation and zinc binding induce transition of tomato abscisic acid stress ripening 1, a water stress- and salt stress-regulated plant-specific protein, from unfolded to folded state.

Authors:  Yehuda Goldgur; Slava Rom; Rodolfo Ghirlando; Doron Shkolnik; Natalia Shadrin; Zvia Konrad; Dudy Bar-Zvi
Journal:  Plant Physiol       Date:  2006-12-22       Impact factor: 8.340

5.  Salt-mediated electrostatics in the association of TATA binding proteins to DNA: a combined molecular mechanics/Poisson-Boltzmann study.

Authors:  Johan H Bredenberg; Cristina Russo; Marcia O Fenley
Journal:  Biophys J       Date:  2008-03-07       Impact factor: 4.033

6.  Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum.

Authors:  Shengxiong Huang; Yongfeng Gao; Jikai Liu; Xiaoli Peng; Xiangli Niu; Zhangjun Fei; Shuqing Cao; Yongsheng Liu
Journal:  Mol Genet Genomics       Date:  2012-05-09       Impact factor: 3.291

7.  A genome wide transcriptional study of Populus alba x P. tremula var. glandulosa in response to nitrogen deficiency stress.

Authors:  Caixia Liu; Song Chen; Sui Wang; Xiyang Zhao; Kailong Li; Su Chen; Guan-Zheng Qu
Journal:  Physiol Mol Biol Plants       Date:  2021-05-31

8.  A proximity-based graph clustering method for the identification and application of transcription factor clusters.

Authors:  Maxwell Spadafore; Kayvan Najarian; Alan P Boyle
Journal:  BMC Bioinformatics       Date:  2017-11-29       Impact factor: 3.169

9.  Genome-wide identification and characterization of cacao WRKY transcription factors and analysis of their expression in response to witches' broom disease.

Authors:  Dayanne Silva Monteiro de Almeida; Daniel Oliveira Jordão do Amaral; Luiz-Eduardo Del-Bem; Emily Bronze Dos Santos; Raner José Santana Silva; Karina Peres Gramacho; Michel Vincentz; Fabienne Micheli
Journal:  PLoS One       Date:  2017-10-30       Impact factor: 3.240

10.  De novo assembly of transcriptome and genome-wide identification reveal GA3 stress-responsive WRKY transcription factors involved in fiber formation in jute (Corchorus capsularis).

Authors:  Lilan Zhang; Xuebei Wan; Yi Xu; Sylvain Niyitanga; Jianmin Qi; Liwu Zhang
Journal:  BMC Plant Biol       Date:  2020-09-01       Impact factor: 4.215

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