Literature DB >> 11959495

Theoretical and computational models of ion channels.

Benoît Roux1.   

Abstract

Computational studies can make meaningful contributions to our understanding of biological ion channels. A wide variety of methods, at different levels of approximation, can be used. Over the past few years, progress in the experimental determination of three-dimensional structures has given a fresh impetus to the theorists. Noteworthy progress has been made in carefully constructing realistic models of a number of complex biological channels to address important questions about their function.

Mesh:

Substances:

Year:  2002        PMID: 11959495     DOI: 10.1016/s0959-440x(02)00307-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  21 in total

1.  The role of the dielectric barrier in narrow biological channels: a novel composite approach to modeling single-channel currents.

Authors:  Artem B Mamonov; Rob D Coalson; Abraham Nitzan; Maria G Kurnikova
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

2.  The implementation of slab geometry for membrane-channel molecular dynamics simulations.

Authors:  David Bostick; Max L Berkowitz
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

3.  Improved 3D continuum calculations of ion flux through membrane channels.

Authors:  Assen Koumanov; Ulrich Zachariae; Harald Engelhardt; Andrey Karshikoff
Journal:  Eur Biophys J       Date:  2003-07-18       Impact factor: 1.733

4.  A microscopic view of ion conduction through the K+ channel.

Authors:  Simon Bernèche; Benoît Roux
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-01       Impact factor: 11.205

5.  Gating of MscL studied by steered molecular dynamics.

Authors:  Justin Gullingsrud; Klaus Schulten
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

6.  Filter flexibility and distortion in a bacterial inward rectifier K+ channel: simulation studies of KirBac1.1.

Authors:  Carmen Domene; Alessandro Grottesi; Mark S P Sansom
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

7.  Coupled motions between pore and voltage-sensor domains: a model for Shaker B, a voltage-gated potassium channel.

Authors:  Werner Treptow; Bernard Maigret; Christophe Chipot; Mounir Tarek
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

8.  Explicit channel conductance: can it be computed?

Authors:  Andriy Anishkin; Sergei Sukharev
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

9.  Molecular dynamics study of gating in the mechanosensitive channel of small conductance MscS.

Authors:  Marcos Sotomayor; Klaus Schulten
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

10.  Crystal structure and functional mechanism of a human antimicrobial membrane channel.

Authors:  Chen Song; Conrad Weichbrodt; Evgeniy S Salnikov; Marek Dynowski; Björn O Forsberg; Burkhard Bechinger; Claudia Steinem; Bert L de Groot; Ulrich Zachariae; Kornelius Zeth
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-20       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.