Literature DB >> 11955609

Postmortem stability of RNA isolated from bovine reproductive tissues.

Richard Fitzpatrick1, Orla M Casey, Dermot Morris, Terry Smith, Richard Powell, Joseph M Sreenan.   

Abstract

Molecular biology is being increasingly used to address the complex problem of bovine infertility. One common concern shared by many of these studies is the postmortem delay in obtaining reproductive tissues and the effect this may have on RNA dependent studies. To address this concern, bovine ovarian, oviduct and uterine tissue samples, collected over intervals ranging from 0 to 96 h postmortem to freeze storage, were analysed to determine the potential effects on RNA quantity and quality. The analysis showed that total RNA yields were not changed significantly by postmortem interval up to 96 h while 28S ribosomal RNA remained intact up to 24 h postmortem. Specific messenger RNA transcripts encoding beta-actin, GAPDH and transforming growth factor-beta were detected in all tissues up to 96 h postmortem using reverse transcriptase-polymerase chain reaction and Northern analysis indicated no detectable mRNA degradation up to 24 h postmortem. Finally, using poly(A)(+) mRNA isolated from ovarian tissues frozen 2 h postmortem, we constructed corpus luteum and ovarian cortex cDNA libraries containing 7.65x10(4) and 1.9x10(6) primary transformants with average cDNA lengths of 2.3 and 1.6 kb respectively. Taken together, these data show that a postmortem delay of up to 24 h does not significantly affect the yield or quality of RNA prepared from bovine reproductive tissues.

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Year:  2002        PMID: 11955609     DOI: 10.1016/s0167-4781(01)00322-0

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  14 in total

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4.  Molecular analysis of different classes of RNA molecules from formalin-fixed paraffin-embedded autoptic tissues: a pilot study.

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5.  Impact of formalin-fixation and paraffin-embedding on the ratio between mRNA copy numbers of differently expressed genes.

Authors:  Dorthe von Smolinski; Ina Leverkoehne; Georg von Samson-Himmelstjerna; Achim D Gruber
Journal:  Histochem Cell Biol       Date:  2005-09-29       Impact factor: 4.304

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Review 7.  RNA expression analysis from formalin fixed paraffin embedded tissues.

Authors:  Susan M Farragher; Austin Tanney; Richard D Kennedy; D Paul Harkin
Journal:  Histochem Cell Biol       Date:  2008-08-05       Impact factor: 4.304

8.  Stability of RNA isolated from post-mortem tissues of Atlantic salmon (Salmo salar L.).

Authors:  P J Seear; G E Sweeney
Journal:  Fish Physiol Biochem       Date:  2007-06-12       Impact factor: 2.794

9.  Quantitative TaqMan real-time PCR assays for gene expression normalisation in feline tissues.

Authors:  Yvonne Kessler; A Katrin Helfer-Hungerbuehler; Valentino Cattori; Marina L Meli; Bigna Zellweger; Pete Ossent; Barbara Riond; Claudia E Reusch; Hans Lutz; Regina Hofmann-Lehmann
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10.  Comprehensive mRNA expression profiling distinguishes tauopathies and identifies shared molecular pathways.

Authors:  Iraad F Bronner; Zoltán Bochdanovits; Patrizia Rizzu; Wouter Kamphorst; Rivka Ravid; John C van Swieten; Peter Heutink
Journal:  PLoS One       Date:  2009-08-28       Impact factor: 3.240

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