Literature DB >> 1195370

Volume occupation, environment and accessibility in proteins. The problem of the protein surface.

J L Finney.   

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Year:  1975        PMID: 1195370     DOI: 10.1016/0022-2836(75)90148-5

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


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  19 in total

1.  Standard atomic volumes in double-stranded DNA and packing in protein--DNA interfaces.

Authors:  K Nadassy; I Tomás-Oliveira; I Alberts; J Janin; S J Wodak
Journal:  Nucleic Acids Res       Date:  2001-08-15       Impact factor: 16.971

2.  Are proteins well-packed?

Authors:  J Liang; K A Dill
Journal:  Biophys J       Date:  2001-08       Impact factor: 4.033

3.  The weighted-volume derivative of a space-filling diagram.

Authors:  Herbert Edelsbrunner; Patrice Koehl
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-24       Impact factor: 11.205

Review 4.  The protein-folding problem: the native fold determines packing, but does packing determine the native fold?

Authors:  M J Behe; E E Lattman; G D Rose
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

5.  Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design.

Authors:  J Liang; H Edelsbrunner; C Woodward
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

6.  Local densities orthogonal to beta-sheet amide planes: patterns of packing in globular proteins.

Authors:  D S Beardsley; W J Kauzmann
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-30       Impact factor: 11.205

7.  Simulating the minimum core for hydrophobic collapse in globular proteins.

Authors:  J Tsai; M Gerstein; M Levitt
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

8.  Evaluating the energetics of empty cavities and internal mutations in proteins.

Authors:  A A Rashin; B H Rashin; A Rashin; R Abagyan
Journal:  Protein Sci       Date:  1997-10       Impact factor: 6.725

9.  Heterogeneity of packing: structural approach.

Authors:  N Kurochkina; G Privalov
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

10.  Characterization of void space in polydisperse sphere packings: Applications to hard-sphere packings and to protein structure analysis.

Authors:  Moumita Maiti; Arun Lakshminarayanan; Srikanth Sastry
Journal:  Eur Phys J E Soft Matter       Date:  2013-01-28       Impact factor: 1.890

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