Literature DB >> 11943548

Protein-water interactions in a dynamic world.

Carla Mattos1.   

Abstract

Protein-water interactions are key to biological function. They have an underlying dynamic component that pervades the functional roles associated both with particular systems and with the properties of proteins in general. This article focuses on the specific ways in which the dynamics of water are important to protein structure, motion and adaptability to changes in the protein environment.

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Year:  2002        PMID: 11943548     DOI: 10.1016/s0968-0004(02)02067-4

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  47 in total

1.  Analyzing molecular interactions.

Authors:  Gregory A Petsko; John R Yates
Journal:  Curr Protoc Bioinformatics       Date:  2011-12

2.  Hyper-mobile water is induced around actin filaments.

Authors:  Syed Rashel Kabir; Keiichi Yokoyama; Koshin Mihashi; Takao Kodama; Makoto Suzuki
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

3.  Residual water modulates QA- -to-QB electron transfer in bacterial reaction centers embedded in trehalose amorphous matrices.

Authors:  Francesco Francia; Gerardo Palazzo; Antonia Mallardi; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

Review 4.  Dynamics and mechanisms of DNA repair by photolyase.

Authors:  Zheyun Liu; Lijuan Wang; Dongping Zhong
Journal:  Phys Chem Chem Phys       Date:  2015-05-14       Impact factor: 3.676

5.  Analysis of protein hydration in ultrahigh-resolution structures of the SRP GTPase Ffh.

Authors:  Ursula D Ramirez; Douglas M Freymann
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-11-23

6.  Acceptable protein and solvent behavior in primary hydration shell simulations of hen lysozyme.

Authors:  Mehdi Bagheri Hamaneh; Matthias Buck
Journal:  Biophys J       Date:  2007-01-26       Impact factor: 4.033

7.  Simulations of RNA base pairs in a nanodroplet reveal solvation-dependent stability.

Authors:  Michael T Sykes; Michael Levitt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-16       Impact factor: 11.205

8.  Conserved water molecules stabilize the Omega-loop in class A beta-lactamases.

Authors:  Fabian Bös; Jürgen Pleiss
Journal:  Antimicrob Agents Chemother       Date:  2008-01-14       Impact factor: 5.191

9.  Role of the active-site solvent in the thermodynamics of factor Xa ligand binding.

Authors:  Robert Abel; Tom Young; Ramy Farid; Bruce J Berne; Richard A Friesner
Journal:  J Am Chem Soc       Date:  2008-02-12       Impact factor: 15.419

10.  Energetics of hydrogen bonds in peptides.

Authors:  Sheh-Yi Sheu; Dah-Yen Yang; H L Selzle; E W Schlag
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-14       Impact factor: 11.205

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