Literature DB >> 11939781

Contribution of buried lysine residues to the oligomerization specificity and stability of the fos coiled coil.

Kathleen M Campbell1, Aaron J Sholders, Kevin J Lumb.   

Abstract

Coiled coils comprise two or more helices characterized by a heptad repeat of amino acids denoted a through g. The buried a and d positions are usually occupied by hydrophobic residues. Fos dimerizes via a coiled coil (leucine zipper) with Jun family members to form the transcription factor AP-1. Fos homodimers are relatively unstable due to unfavorable interhelical electrostatic interactions within the Fos two-stranded coiled coil. The Fos coiled coil contains two polar position a Lys residues (Lys 16 and Lys 30 of Fos-p1, a peptide corresponding to the coiled-coil domain of v-Fos). Lys 16 and Lys 30 of Fos-p1 were replaced individually and together with the unnatural amino acid norleucine (2-aminohexanoic acid), which corresponds to a deletion of the Lys epsilon-amino group. The midpoint of thermal denaturation (T(m)) of Fos-p1 (10 microM) is 30 degrees C at pH 7. The Lys 16 --> Nle variant forms predominantly homodimers that are relatively unstable (T(m) = 46 degrees C). The Lys 30 --> Nle variant forms a stable homotetramer (T(m) = 60 degrees C). The Lys 16/Lys 30 --> Nle variant forms a very stable homotetramer (T(m) = 80 degrees C). The results show that (i) the effects of buried position a Lys residues on coiled-coil oligomerization are context dependent and (ii) electrostatic destabilization of the Fos homodimer can be mitigated by an oligomerization switch moderated by a single buried Lys residue.

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Year:  2002        PMID: 11939781     DOI: 10.1021/bi0159276

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  Unique stabilizing interactions identified in the two-stranded alpha-helical coiled-coil: crystal structure of a cortexillin I/GCN4 hybrid coiled-coil peptide.

Authors:  Darin L Lee; Sergei Ivaninskii; Peter Burkhard; Robert S Hodges
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725

2.  Semirational design of Jun-Fos coiled coils with increased affinity: Universal implications for leucine zipper prediction and design.

Authors:  Jody M Mason; Mark A Schmitz; Kristian M Müller; Katja M Arndt
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-05       Impact factor: 11.205

3.  Orientation and oligomerization specificity of the Bcr coiled-coil oligomerization domain.

Authors:  Christina M Taylor; Amy E Keating
Journal:  Biochemistry       Date:  2005-12-13       Impact factor: 3.162

4.  Complementary interhelical interactions between three buried Glu-Lys pairs within three heptad repeats are essential for Hec1-Nuf2 heterodimerization and mitotic progression.

Authors:  Bryan Ngo; Chun-Mei Hu; Xuning Emily Guo; Brittany Ngo; Randy Wei; Jiewen Zhu; Wen-Hwa Lee
Journal:  J Biol Chem       Date:  2013-10-15       Impact factor: 5.157

5.  A synthetic coiled-coil interactome provides heterospecific modules for molecular engineering.

Authors:  Aaron W Reinke; Robert A Grant; Amy E Keating
Journal:  J Am Chem Soc       Date:  2010-05-05       Impact factor: 15.419

6.  Strong contributions from vertical triads to helix-partner preferences in parallel coiled coils.

Authors:  Jay D Steinkruger; Gail J Bartlett; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-09-13       Impact factor: 15.419

7.  The d'--d--d' vertical triad is less discriminating than the a'--a--a' vertical triad in the antiparallel coiled-coil dimer motif.

Authors:  Jay D Steinkruger; Gail J Bartlett; Erik B Hadley; Lindsay Fay; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-01-31       Impact factor: 15.419

8.  Side-chain pairing preferences in the parallel coiled-coil dimer motif: insight on ion pairing between core and flanking sites.

Authors:  Jay D Steinkruger; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-06-09       Impact factor: 15.419

9.  Predicting helix orientation for coiled-coil dimers.

Authors:  James R Apgar; Karl N Gutwin; Amy E Keating
Journal:  Proteins       Date:  2008-08-15

10.  Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays.

Authors:  Aaron W Reinke; Gevorg Grigoryan; Amy E Keating
Journal:  Biochemistry       Date:  2010-03-09       Impact factor: 3.162

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