Literature DB >> 11909527

Protein folding and unfolding at atomic resolution.

Alan R Fersht1, Valerie Daggett.   

Abstract

Experiment and simulation are now conspiring to give atomic-level descriptions of protein folding relevant to folding, misfolding, trafficking, and degradation in the cell. We are on the threshold of predicting those protein folding events using simulation that has been carefully benchmarked by experiment.

Mesh：

Substances：

Year:  2002        PMID： 11909527     DOI： 10.1016/s0092-8674(02)00620-7

Source DB:  PubMed          Journal:  Cell        ISSN： 0092-8674            Impact factor:   41.582


  130 in total

1.  On the simulation of protein folding by short time scale molecular dynamics and distributed computing.

Authors:  Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-18       Impact factor: 11.205

2.  The ensemble folding kinetics of protein G from an all-atom Monte Carlo simulation.

Authors:  Jun Shimada; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-06       Impact factor: 11.205

3.  Refolding of a high molecular weight protein: salt effect on collapse.

Authors:  D Lairez; E Pauthe; J Pelta
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

4.  Calculation of mutational free energy changes in transition states for protein folding.

Authors:  Kresten Lindorff-Larsen; Emanuele Paci; Luis Serrano; Christopher M Dobson; Michele Vendruscolo
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

5.  Rapid amyloid fiber formation from the fast-folding WW domain FBP28.

Authors:  Neil Ferguson; John Berriman; Miriana Petrovich; Timothy D Sharpe; John T Finch; Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-01       Impact factor: 11.205

6.  Simulating disorder-order transitions in molecular recognition of unstructured proteins: where folding meets binding.

Authors:  Gennady M Verkhivker; Djamal Bouzida; Daniel K Gehlhaar; Paul A Rejto; Stephan T Freer; Peter W Rose
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-15       Impact factor: 11.205

7.  Phi-value analysis and the nature of protein-folding transition states.

Authors:  Alan R Fersht; Satoshi Sato
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-18       Impact factor: 11.205

8.  Multiple folding pathways of the SH3 domain.

Authors:  Jose M Borreguero; Feng Ding; Sergey V Buldyrev; H Eugene Stanley; Nikolay V Dokholyan
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

9.  Reversible aggregation plays a crucial role on the folding landscape of p53 core domain.

Authors:  Daniella Ishimaru; Luis M T R Lima; Lenize F Maia; Priscila M Lopez; Ana P Ano Bom; Ana P Valente; Jerson L Silva
Journal:  Biophys J       Date:  2004-08-06       Impact factor: 4.033

10.  Linking time-series of single-molecule experiments with molecular dynamics simulations by machine learning.

Authors:  Yasuhiro Matsunaga; Yuji Sugita
Journal:  Elife       Date:  2018-05-03       Impact factor: 8.140
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