Literature DB >> 11904176

A tripeptide discriminator for stop codon recognition.

Yoshikazu Nakamura1, Koichi Ito.   

Abstract

Only recently has it been established that a tripeptide in the bacterial release factors (RFs), RF1 and RF2, is responsible for the stop codon recognition. This functional mimic of the anticodon of tRNA is referred to as a tripeptide 'anticodon' or a tripeptide discriminator. Here we review the experimental background and process leading to this discovery, and strengthen functional evidence for the tripeptide determinant for deciphering stop codons in mRNAs in prokaryotes.

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Year:  2002        PMID: 11904176     DOI: 10.1016/s0014-5793(02)02330-x

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  15 in total

1.  Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s.

Authors:  Laurent Chavatte; Stéphanie Kervestin; Alain Favre; Olivier Jean-Jean
Journal:  EMBO J       Date:  2003-04-01       Impact factor: 11.598

Review 2.  Termination of translation: interplay of mRNA, rRNAs and release factors?

Authors:  Lev Kisselev; Måns Ehrenberg; Ludmila Frolova
Journal:  EMBO J       Date:  2003-01-15       Impact factor: 11.598

3.  Identification of eRF1 residues that play critical and complementary roles in stop codon recognition.

Authors:  Sara E Conard; Jessica Buckley; Mai Dang; Gregory J Bedwell; Richard L Carter; Mohamed Khass; David M Bedwell
Journal:  RNA       Date:  2012-04-27       Impact factor: 4.942

4.  The codon specificity of eubacterial release factors is determined by the sequence and size of the recognition loop.

Authors:  David J Young; Christina D Edgar; Elizabeth S Poole; Warren P Tate
Journal:  RNA       Date:  2010-06-28       Impact factor: 4.942

5.  Distinct eRF3 requirements suggest alternate eRF1 conformations mediate peptide release during eukaryotic translation termination.

Authors:  Hua Fan-Minogue; Ming Du; Andrey V Pisarev; Adam K Kallmeyer; Joe Salas-Marco; Kim M Keeling; Sunnie R Thompson; Tatyana V Pestova; David M Bedwell
Journal:  Mol Cell       Date:  2008-06-06       Impact factor: 17.970

6.  Crystal structure of the 70S ribosome bound with the Q253P mutant form of release factor RF2.

Authors:  Natalia Santos; Jianyu Zhu; John Paul Donohue; Andrei A Korostelev; Harry F Noller
Journal:  Structure       Date:  2013-06-13       Impact factor: 5.006

7.  Mitochondrial release factor in yeast: interplay of functional domains.

Authors:  Jan Kutner; Joanna Towpik; Krzysztof Ginalski; Magdalena Boguta
Journal:  Curr Genet       Date:  2008-01-26       Impact factor: 3.886

8.  Differential regulation and substrate preferences in two peptide transporters of Saccharomyces cerevisiae.

Authors:  Houjian Cai; Melinda Hauser; Fred Naider; Jeffrey M Becker
Journal:  Eukaryot Cell       Date:  2007-08-10

9.  Crystal structure of a translation termination complex formed with release factor RF2.

Authors:  Andrei Korostelev; Haruichi Asahara; Laura Lancaster; Martin Laurberg; Alexander Hirschi; Jianyu Zhu; Sergei Trakhanov; William G Scott; Harry F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

Review 10.  A structural view on the mechanism of the ribosome-catalyzed peptide bond formation.

Authors:  Miljan Simonović; Thomas A Steitz
Journal:  Biochim Biophys Acta       Date:  2009-07-09
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