Literature DB >> 11880442

Comparison of molecular and conventional methods for typing of enteroviral isolates.

Darly Joseph Manayani1, R V Shaji, G John Fletcher, Thomas Cherian, N Murali, N Sathish, Tilak Solomon, Chandran Gnanamuthu, Gopalan Sridharan.   

Abstract

Twenty-eight enteroviral isolates obtained from various clinical specimens were typed by Lim-Benyesh-Melnick (LBM) pool-based neutralization, PCR-restriction fragment length polymorphism (RFLP), and partial sequencing of the VP1 region of the enteroviral genome. Sequencing was found to be a good alternative to LBM typing, while PCR-RFLP was inadequate for identification of enteroviral isolates.

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Year:  2002        PMID： 11880442      PMCID： PMC120247          DOI： 10.1128/JCM.40.3.1069-1070.2002

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  12 in total

1.  Comparison of classic and molecular approaches for the identification of untypeable enteroviruses.

Authors:  M S Oberste; K Maher; M R Flemister; G Marchetti; D R Kilpatrick; M A Pallansch
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

2.  Typing of human enteroviruses by partial sequencing of VP1.

Authors:  M S Oberste; K Maher; D R Kilpatrick; M R Flemister; B A Brown; M A Pallansch
Journal:  J Clin Microbiol       Date:  1999-05       Impact factor: 5.948

3.  Detection and rapid differentiation of human enteroviruses following genomic amplification.

Authors:  M M Kuan
Journal:  J Clin Microbiol       Date:  1997-10       Impact factor: 5.948

4.  Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification.

Authors:  M S Oberste; K Maher; D R Kilpatrick; M A Pallansch
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

5.  Polymerase chain reaction for human picornaviruses.

Authors:  T Hyypiä; P Auvinen; M Maaronen
Journal:  J Gen Virol       Date:  1989-12       Impact factor: 3.891

6.  Lyophilized combination pools of enterovirus equine antisera: new LBM pools prepared from reserves of antisera stored frozen for two decades.

Authors:  J L Melnick; I L Wimberly
Journal:  Bull World Health Organ       Date:  1985       Impact factor: 9.408

7.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

8.  Enterovirus 71 isolated from China is serologically similar to the prototype E71 BrCr strain but differs in the 5'-noncoding region.

Authors:  Z M Zheng; P J He; D Caueffield; M Neumann; S Specter; C C Baker; M J Bankowski
Journal:  J Med Virol       Date:  1995-10       Impact factor: 2.327

9.  Nested PCR for specific detection and rapid identification of human picornaviruses.

Authors:  U Kämmerer; B Kunkel; K Korn
Journal:  J Clin Microbiol       Date:  1994-02       Impact factor: 5.948

10.  Polymerase chain reaction and sequencing for typing rhinovirus RNA.

Authors:  J Mori; J P Clewley
Journal:  J Med Virol       Date:  1994-12       Impact factor: 2.327
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  4 in total

1.  Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens.

Authors:  W Allan Nix; M Steven Oberste; Mark A Pallansch
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

2.  Rapid identification of the coxsackievirus A24 variant by molecular serotyping in an outbreak of acute hemorrhagic conjunctivitis.

Authors:  Sang-Won Park; Chang-Seop Lee; Hee-Chang Jang; Eui-Chong Kim; Myoung-don Oh; Kang-Won Choe
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

3.  Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes.

Authors:  M Steven Oberste; Kaija Maher; Mark A Pallansch
Journal:  J Virol       Date:  2004-01       Impact factor: 5.103

4.  Accuracy of diagnostic methods and surveillance sensitivity for human enterovirus, South Korea, 1999-2011.

Authors:  Ji-Yeon Hyeon; Seoyeon Hwang; Hyejin Kim; Jaehyoung Song; Jeongbae Ahn; Byunghak Kang; Kisoon Kim; Wooyoung Choi; Jae Keun Chung; Cheon-Hyun Kim; Kyungsoon Cho; Youngmee Jee; Jonghyun Kim; Kisang Kim; Sun-Hee Kim; Min-Ji Kim; Doo-Sung Cheon
Journal:  Emerg Infect Dis       Date:  2013-08       Impact factor: 6.883
  4 in total

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