Literature DB >> 11876658

Lignin peroxidase oxidation of veratryl alcohol: effects of the mutants H82A, Q222A, W171A, and F267L.

Maarten D Sollewijn Gelpke1, Jooyoung Lee, Michael H Gold.   

Abstract

The site-directed mutations H82A and Q222A (residues near the heme access channel), and W171A and F267L (residues near the surface of the protein) were introduced into the gene encoding lignin peroxidase (LiP) isozyme H8 from Phanerochaete chrysosporium. The variant enzymes were produced by homologous expression in P. chrysosporium, purified to homogeneity, and characterized by kinetic and spectroscopic methods. The molecular masses, the pIs, and the UV-vis absorption spectra of the ferric and oxidized states of these LiP variant enzymes were similar to those of wild-type LiP (wtLiP), suggesting the overall protein and heme environments were not significantly affected by these mutations. The steady-state and transient-state parameters for the oxidation of veratryl alcohol (VA) by the H82A and Q222A variants were very similar to those of wtLiP, demonstrating that these residues are not involved in VA oxidation and that the heme access channel is an unlikely site for VA oxidation. In contrast, the W171A variant was unable to oxidize VA, confirming the apparent essentiality of Trp171 in VA oxidation by LiP. The kinetic rates of spontaneous LiP compound I reduction in the absence of VA were similar for W171A and wild-type LiP, suggesting that there may not be a radical formed on the Trp171 residue of LiP in the absence of VA. For the F267L variant, both the K(m app) value in the steady state and the apparent dissociation constant (K(D)) for compound II reduction were greater than those for wtLiP. These results indicate that the site including W171 and F267, rather than the heme access channel, is the site of VA binding and oxidation in LiP. Whereas Trp171 appears to be essential for VA oxidation, it apparently is not independently responsible for the spontaneous decomposition of oxidized intermediates. The nearby Phe267 apparently is also involved in VA binding.

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Year:  2002        PMID: 11876658     DOI: 10.1021/bi011930d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Molecular dynamics simulations of lignin peroxidase in solution.

Authors:  M Francesca Gerini; Danilo Roccatano; Enrico Baciocchi; Alfredo Di Nola
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

2.  Molecular evolution and diversity of lignin degrading heme peroxidases in the Agaricomycetes.

Authors:  Ingo Morgenstern; Shlomit Klopman; David S Hibbett
Journal:  J Mol Evol       Date:  2008-03       Impact factor: 2.395

3.  Crystallographic, kinetic, and spectroscopic study of the first ligninolytic peroxidase presenting a catalytic tyrosine.

Authors:  Yuta Miki; Fabiola R Calviño; Rebecca Pogni; Stefania Giansanti; Francisco J Ruiz-Dueñas; María Jesús Martínez; Riccardo Basosi; Antonio Romero; Angel T Martínez
Journal:  J Biol Chem       Date:  2011-03-02       Impact factor: 5.157

4.  Direct oxidation of polymeric substrates by multifunctional manganese peroxidase isoenzyme from Pleurotus ostreatus without redox mediators.

Authors:  Hisatoshi Kamitsuji; Takashi Watanabe; Yoichi Honda; Masaaki Kuwahara
Journal:  Biochem J       Date:  2005-03-01       Impact factor: 3.857

5.  Protein radicals in fungal versatile peroxidase: catalytic tryptophan radical in both compound I and compound II and studies on W164Y, W164H, and W164S variants.

Authors:  Francisco J Ruiz-Dueñas; Rebecca Pogni; María Morales; Stefania Giansanti; María J Mate; Antonio Romero; María Jesús Martínez; Riccardo Basosi; Angel T Martínez
Journal:  J Biol Chem       Date:  2009-01-21       Impact factor: 5.157

6.  Mechanism for oxidation of high-molecular-weight substrates by a fungal versatile peroxidase, MnP2.

Authors:  Takahisa Tsukihara; Yoichi Honda; Ryota Sakai; Takahito Watanabe; Takashi Watanabe
Journal:  Appl Environ Microbiol       Date:  2008-03-07       Impact factor: 4.792

7.  Ligninase-mediated transformation of 4,4'-dibromodiphenyl ether (BDE 15).

Authors:  Yiping Feng; Liang Mao; Yijun Chen; Shixiang Gao
Journal:  Environ Sci Pollut Res Int       Date:  2013-06-19       Impact factor: 4.223

8.  Improvement of catalytic performance of lignin peroxidase for the enhanced degradation of lignocellulose biomass based on the imbedded electron-relay in long-range electron transfer route.

Authors:  Le Thanh Mai Pham; Su Jin Kim; Yong Hwan Kim
Journal:  Biotechnol Biofuels       Date:  2016-11-15       Impact factor: 6.040

9.  Diversity of Ligninolytic Enzymes and Their Genes in Strains of the Genus Ganoderma: Applicable for Biodegradation of Xenobiotic Compounds?

Authors:  Giselle Torres-Farradá; Ana M Manzano León; François Rineau; Lucía L Ledo Alonso; María I Sánchez-López; Sofie Thijs; Jan Colpaert; Miguel Ramos-Leal; Gilda Guerra; Jaco Vangronsveld
Journal:  Front Microbiol       Date:  2017-05-23       Impact factor: 5.640

10.  Demonstration of Lignin-to-Peroxidase Direct Electron Transfer: A TRANSIENT-STATE KINETICS, DIRECTED MUTAGENESIS, EPR, AND NMR STUDY.

Authors:  Verónica Sáez-Jiménez; Maria Camilla Baratto; Rebecca Pogni; Jorge Rencoret; Ana Gutiérrez; José Ignacio Santos; Angel T Martínez; Francisco Javier Ruiz-Dueñas
Journal:  J Biol Chem       Date:  2015-08-03       Impact factor: 5.157

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