Literature DB >> 11872447

Development of a virus concentration method and its application to detection of enterovirus and norwalk virus from coastal seawater.

Hiroyuki Katayama1, Akihiro Shimasaki, Shinichiro Ohgaki.   

Abstract

We developed a new procedure for concentration of enteric viruses from water using a negatively charged membrane. Rinsing the membrane with 0.5 mM H(2)SO(4) (pH 3.0) in order to elute cations prior to viral elution with 1 mM NaOH (pH 10.5) promoted poliovirus recovery yields from 33 to 95% when applied to pure water and 38 to 89% when applied to natural seawater from Tokyo Bay, Japan, respectively. This method showed average recovery yields of spiked poliovirus of 62% (n = 8) from 1 liter of artificial seawater. This method showed higher recovery yields (>61%) than that of the conventional method using positively charged membrane (6%) when applied to seawater. This method is also free from beef extract elution, which has an inhibitory effect in the subsequent viral genome detection by reverse transcription-PCR. Naturally occurring Norwalk viruses from 2 liters of Tokyo Bay water in winter and infectious enteroviruses from 2 liters of recreational coastal seawater in summer were detected by using this viral concentration method.

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Year:  2002        PMID: 11872447      PMCID: PMC123733          DOI: 10.1128/AEM.68.3.1033-1039.2002

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  31 in total

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Authors:  J Green; K Henshilwood; C I Gallimore; D W Brown; D N Lees
Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

2.  A method to remove environmental inhibitors prior to the detection of waterborne enteric viruses by reverse transcription-polymerase chain reaction.

Authors:  M M Ijzerman; D R Dahling; G S Fout
Journal:  J Virol Methods       Date:  1997-01       Impact factor: 2.014

3.  Influence of salts on virus adsorption to microporous filters.

Authors:  J Lukasik; T M Scott; D Andryshak; S R Farrah
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

4.  Concentration of enteroviruses on membrane filters.

Authors:  C Wallis; J L Melnick
Journal:  J Virol       Date:  1967-06       Impact factor: 5.103

5.  Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus, and Norwalk virus by reverse transcription-PCR.

Authors:  K J Schwab; R De Leon; M D Sobsey
Journal:  Appl Environ Microbiol       Date:  1995-02       Impact factor: 4.792

6.  Immunoaffinity concentration and purification of waterborne enteric viruses for detection by reverse transcriptase PCR.

Authors:  K J Schwab; R De Leon; M D Sobsey
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

7.  Detection of enteroviruses in groundwater with the polymerase chain reaction.

Authors:  M Abbaszadegan; M S Huber; C P Gerba; I L Pepper
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

8.  Detection of hepatitis E virus in raw and treated wastewater with the polymerase chain reaction.

Authors:  N Jothikumar; K Aparna; S Kamatchiammal; R Paulmurugan; S Saravanadevi; P Khanna
Journal:  Appl Environ Microbiol       Date:  1993-08       Impact factor: 4.792

9.  Small, round-structured viruses (SRSVs) associated with acute gastroenteritis outbreaks in Gifu, Japan.

Authors:  H Kawamoto; S Hasegawa; S Sawatari; C Miwa; O Morita; T Hosokawa; H Tanaka
Journal:  Microbiol Immunol       Date:  1993       Impact factor: 1.955

10.  Detection of Norwalk virus and hepatitis A virus in shellfish tissues with the PCR.

Authors:  R L Atmar; F H Neill; J L Romalde; F Le Guyader; C M Woodley; T G Metcalf; M K Estes
Journal:  Appl Environ Microbiol       Date:  1995-08       Impact factor: 4.792

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  100 in total

1.  Genotype distribution of human sapoviruses in wastewater in Japan.

Authors:  Masaaki Kitajima; Eiji Haramoto; Chanetta Phanuwan; Hiroyuki Katayama
Journal:  Appl Environ Microbiol       Date:  2011-04-22       Impact factor: 4.792

2.  Detection of noroviruses in tap water in Japan by means of a new method for concentrating enteric viruses in large volumes of freshwater.

Authors:  Eiji Haramoto; Hiroyuki Katayama; Shinichiro Ohgaki
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

3.  Application of a receptor-binding capture quantitative reverse transcription-PCR assay to concentrate human norovirus from sewage and to study the distribution and stability of the virus.

Authors:  Peng Tian; David Yang; Liangwen Pan; Robert Mandrell
Journal:  Appl Environ Microbiol       Date:  2011-11-18       Impact factor: 4.792

4.  Development of a latex agglutination test for norovirus detection.

Authors:  Heetae Lee; YoungBin Park; Misoon Kim; Youngmee Jee; Doo-Sung Cheon; Hae Sook Jeong; GwangPyo Ko
Journal:  J Microbiol       Date:  2010-08-20       Impact factor: 3.422

5.  Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking.

Authors:  Theng-Theng Fong; Dale W Griffin; Erin K Lipp
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

6.  Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan.

Authors:  Eiji Haramoto; Hiroyuki Katayama; Kumiko Oguma; Shinichiro Ohgaki
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

7.  Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR.

Authors:  Jed A Fuhrman; Xiaolin Liang; Rachel T Noble
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

8.  Assessment of gastroenteric viruses from wastewater directly discharged into Uruguay River, Uruguay.

Authors:  M Victoria; L F L Tort; M García; A Lizasoain; L Maya; J P G Leite; M P Miagostovich; J Cristina; R Colina
Journal:  Food Environ Virol       Date:  2014-04-29       Impact factor: 2.778

9.  Assessment of water quality in a border region between the Atlantic forest and an urbanised area in Rio de Janeiro, Brazil.

Authors:  Marize Pereira Miagostovich; Flávia Ramos Guimarães; Carmen Baur Vieira; Tulio Machado Fumian; Nilson Porto da Gama; Matias Victoria; Jaqueline Mendes de Oliveira; Anna Carolina de Oliveira Mendes; Ana Maria Coimbra Gaspar; José Paulo Gagliardi Leite
Journal:  Food Environ Virol       Date:  2014-05-13       Impact factor: 2.778

10.  An Environmental Surveillance in Uruguay Reveals the Presence of Highly Divergent Types of Human Enterovirus Species C and a High Frequency of Species A and B Types.

Authors:  Andrés Lizasoain; Fernanda M Burlandy; Matías Victoria; Luis F López Tort; Edson E da Silva; Rodney Colina
Journal:  Food Environ Virol       Date:  2018-06-16       Impact factor: 2.778

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