Literature DB >> 11862549

The aminopeptidase from Aeromonas proteolytica can function as an esterase.

David L Bienvenue1, Rebecca S Mathew, Dagmar Ringe, Richard C Holz.   

Abstract

The aminopeptidase from Aeromonas proteolytica (AAP) can catalyze the hydrolysis of L-leucine ethyl ester ( L-Leu-OEt) with a rate of 96 +/- 5 s-1 and a Km of 700 microM. The observed turnover number for L-Leu-OEt hydrolysis by AAP is similar to that observed for peptide hydrolysis, which is 67 +/- 5 s-1. The k(cat) values for the hydrolysis of L-Leu-OEt and L-leucine- p-nitroanilide ( L- pNA) catalyzed by AAP were determined at different pH values under saturating substrate concentrations. Construction of an Arrhenius plot from the temperature dependence of AAP-catalyzed ester hydrolysis indicates that the rate-limiting step does not change as a function of temperature and is product formation. The activation energy ( Ea) for the activated ES ester complex is 13.7 kJ mol-1, while the enthalpy and entropy of activation at 25 degrees C calculated over the temperature range 298-338 K are 11.2 kJ mol-1 and -175 J K-1 mol-1, respectively. The free energy of activation at 25 degrees C was found to be 63.4 kJ mol-1. The enthalpy of ionization was also measured and was found to be very similar for both peptide and ester substrates, yielding values of 20 kJ mol-1 for L-Leu-OEt and 25 kJ mol-1 for L- pNA. For peptide and L-amino acid ester cleavage reactions catalyzed by AAP, and 6.07, respectively. Proton inventory data suggest that two protons are transferred in the rate-limiting step of ester hydrolysis while only one is transferred in peptide hydrolysis. The combination of these data with the available X-ray crystallographic, kinetic, spectroscopic, and thermodynamic data for AAP provides new insight into the catalytic mechanism of AAP.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11862549     DOI: 10.1007/s007750100280

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  5 in total

1.  Dipeptide synthesis by an aminopeptidase from Streptomyces septatus TH-2 and its application to synthesis of biologically active peptides.

Authors:  Jiro Arima; Yoshiko Uesugi; Misugi Uraji; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Change in substrate preference of Streptomyces aminopeptidase through modification of the environment around the substrate binding site.

Authors:  Jiro Arima; Yoshiko Uesugi; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2006-10-06       Impact factor: 4.792

3.  Alteration of leucine aminopeptidase from Streptomyces septatus TH-2 to phenylalanine aminopeptidase by site-directed mutagenesis.

Authors:  Jiro Arima; Yoshiko Uesugi; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

4.  Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.

Authors:  Ruslan Sanishvili; Alexander F Yakunin; Roman A Laskowski; Tatiana Skarina; Elena Evdokimova; Amanda Doherty-Kirby; Gilles A Lajoie; Janet M Thornton; Cheryl H Arrowsmith; Alexei Savchenko; Andrzej Joachimiak; Aled M Edwards
Journal:  J Biol Chem       Date:  2003-05-05       Impact factor: 5.157

5.  Metal content of metallo-beta-lactamase L1 is determined by the bioavailability of metal ions.

Authors:  Zhenxin Hu; Thusitha S Gunasekera; Lauren Spadafora; Brian Bennett; Michael W Crowder
Journal:  Biochemistry       Date:  2008-07-03       Impact factor: 3.162

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.