Literature DB >> 11847096

Interactive InterPro-based comparisons of proteins in whole genomes.

A Kanapin1, R Apweiler, M Biswas, W Fleischmann, Y Karavidopoulou, P Kersey, E V Kriventseva, V Mittard, N Mulder, T Oinn, I Phan, F Servant, E Zdobnov.   

Abstract

MOTIVATION: The SWISS-PROT group at the EBI has developed the Proteome Analysis Database utilizing existing resources and providing comprehensive and integrated comparative analysis of the predicted protein coding sequences of the complete genomes of bacteria, archaea and eukaryotes. The Proteome Analysis Database is accompanied by a program that has been designed to carry out interactive InterPro proteome comparisons for any one proteome against any other one or more of the proteomes in the database.

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Year:  2002        PMID： 11847096     DOI： 10.1093/bioinformatics/18.2.374

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  2 in total

1.  The Proteome Analysis database: a tool for the in silico analysis of whole proteomes.

Authors:  Manuela Pruess; Wolfgang Fleischmann; Alexander Kanapin; Youla Karavidopoulou; Paul Kersey; Evgenia Kriventseva; Virginie Mittard; Nicola Mulder; Isabelle Phan; Florence Servant; Rolf Apweiler
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

2.  Integr8 and Genome Reviews: integrated views of complete genomes and proteomes.

Authors:  Paul Kersey; Lawrence Bower; Lorna Morris; Alan Horne; Robert Petryszak; Carola Kanz; Alexander Kanapin; Ujjwal Das; Karine Michoud; Isabelle Phan; Alexandre Gattiker; Tamara Kulikova; Nadeem Faruque; Karyn Duggan; Peter Mclaren; Britt Reimholz; Laurent Duret; Simon Penel; Ingmar Reuter; Rolf Apweiler
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971
  2 in total

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