Literature DB >> 11847089

Generating samples under a Wright-Fisher neutral model of genetic variation.

Richard R Hudson1.   

Abstract

A Monte Carlo computer program is available to generate samples drawn from a population evolving according to a Wright-Fisher neutral model. The program assumes an infinite-sites model of mutation, and allows recombination, gene conversion, symmetric migration among subpopulations, and a variety of demographic histories. The samples produced can be used to investigate the sampling properties of any sample statistic under these neutral models.

Mesh:

Year:  2002        PMID: 11847089     DOI: 10.1093/bioinformatics/18.2.337

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  1059 in total

1.  A method for the assessment of disease associations with single-nucleotide polymorphism haplotypes and environmental variables in case-control studies.

Authors:  Lue Ping Zhao; Shuying Sue Li; Najma Khalid
Journal:  Am J Hum Genet       Date:  2003-04-16       Impact factor: 11.025

2.  Can a sex-biased human demography account for the reduced effective population size of chromosome X in non-Africans?

Authors:  Alon Keinan; David Reich
Journal:  Mol Biol Evol       Date:  2010-05-07       Impact factor: 16.240

3.  Human population dispersal "Out of Africa" estimated from linkage disequilibrium and allele frequencies of SNPs.

Authors:  Brian P McEvoy; Joseph E Powell; Michael E Goddard; Peter M Visscher
Journal:  Genome Res       Date:  2011-04-25       Impact factor: 9.043

4.  Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans.

Authors:  Josep M Comeron
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-21       Impact factor: 11.205

5.  Estimating the contribution of mutation, recombination and gene conversion in the generation of haplotypic diversity.

Authors:  Peter L Morrell; Donna M Toleno; Karen E Lundy; Michael T Clegg
Journal:  Genetics       Date:  2006-04-19       Impact factor: 4.562

6.  A history of recurrent positive selection at the toll-like receptor 5 in primates.

Authors:  Gabriela Wlasiuk; Soofia Khan; William M Switzer; Michael W Nachman
Journal:  Mol Biol Evol       Date:  2009-01-29       Impact factor: 16.240

7.  Inductive determination of allele frequency spectrum probabilities in structured populations.

Authors:  Marcy K Uyenoyama; Naoki Takebayashi; Seiji Kumagai
Journal:  Theor Popul Biol       Date:  2019-01-11       Impact factor: 1.570

8.  A new approach to estimate parameters of speciation models with application to apes.

Authors:  Celine Becquet; Molly Przeworski
Journal:  Genome Res       Date:  2007-08-21       Impact factor: 9.043

9.  Contrasting patterns of introgression at X-linked loci across the hybrid zone between subspecies of the European rabbit (Oryctolagus cuniculus).

Authors:  Armando Geraldes; Nuno Ferrand; Michael W Nachman
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

10.  Evidence of positive selection for a glycogen synthase (GYS1) mutation in domestic horse populations.

Authors:  Annette M McCoy; Robert Schaefer; Jessica L Petersen; Peter L Morrell; Megan A Slamka; James R Mickelson; Stephanie J Valberg; Molly E McCue
Journal:  J Hered       Date:  2013-11-08       Impact factor: 2.645

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.