Literature DB >> 11846790

Expression and characterization of active site mutants of hevamine, a chitinase from the rubber tree Hevea brasiliensis.

Evert Bokma1, Henriëtte J Rozeboom, Mark Sibbald, Bauke W Dijkstra, Jaap J Beintema.   

Abstract

Hevamine is a chitinase from the rubber tree Hevea brasiliensis. Its active site contains Asp125, Glu127, and Tyr183, which interact with the -1 sugar residue of the substrate. To investigate their role in catalysis, we have successfully expressed wild-type enzyme and mutants of these residues as inclusion bodies in Escherichia coli. After refolding and purification they were characterized by both structural and enzyme kinetic studies. Mutation of Tyr183 to phenylalanine produced an enzyme with a lower k(cat) and a slightly higher K(m) than the wild-type enzyme. Mutating Asp125 and Glu127 to alanine gave mutants with approximately 2% residual activity. In contrast, the Asp125Asn mutant retained substantial activity, with an approximately twofold lower k(cat) and an approximately twofold higher K(m) than the wild-type enzyme. More interestingly, it showed activity to higher pH values than the other variants. The X-ray structure of the Asp125Ala/Glu127Ala double mutant soaked with chitotetraose shows that, compared with wild-type hevamine, the carbonyl oxygen atom of the N-acetyl group of the -1 sugar residue has rotated away from the C1 atom of that residue. The combined structural and kinetic data show that Asp125 and Tyr183 contribute to catalysis by positioning the carbonyl oxygen of the N-acetyl group near to the C1 atom. This allows the stabilization of a positively charged transient intermediate, in agreement with a previous proposal that the enzyme makes use of substrate-assisted catalysis.

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Year:  2002        PMID: 11846790     DOI: 10.1046/j.0014-2956.2001.02721.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  16 in total

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2.  Characterization of a nucleus-encoded chitinase from the yeast Kluyveromyces lactis.

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4.  A novel family of lectins evolutionarily related to class V chitinases: an example of neofunctionalization in legumes.

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7.  The cyclic dipeptide CI-4 [cyclo-(l-Arg-d-Pro)] inhibits family 18 chitinases by structural mimicry of a reaction intermediate.

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8.  Structural insights into the mechanism and inhibition of eukaryotic O-GlcNAc hydrolysis.

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9.  Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases.

Authors:  Christina M Payne; Jamil Baban; Svein J Horn; Paul H Backe; Andrew S Arvai; Bjørn Dalhus; Magnar Bjørås; Vincent G H Eijsink; Morten Sørlie; Gregg T Beckham; Gustav Vaaje-Kolstad
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

10.  Structural investigation of a novel N-acetyl glucosamine binding chi-lectin which reveals evolutionary relationship with class III chitinases.

Authors:  Dipak N Patil; Manali Datta; Aditya Dev; Sonali Dhindwal; Nirpendra Singh; Pushpanjali Dasauni; Suman Kundu; Ashwani K Sharma; Shailly Tomar; Pravindra Kumar
Journal:  PLoS One       Date:  2013-05-23       Impact factor: 3.240

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