Literature DB >> 11846575

Numerical simulation of one- and two-dimensional ESEEM experiments.

Z L Madi1, S Van Doorslaer, A Schweiger.   

Abstract

Numerical simulation has become an indispensable tool for the interpretation of pulse EPR experiments. In this work it is shown how automatic orientation selection, grouping of operator factors, and direct selection and elimination of coherences can be used to improve the efficiency of time-domain simulations of one- and two-dimensional electron spin echo envelope modulation (ESEEM) spectra. The program allows for the computation of magnetic interactions of any symmetry and can be used to simulate spin systems with an arbitrary number of nuclei with any spin quantum number. Experimental restrictions due to finite microwave pulse lengths are addressed and the enhancement of forbidden coherences by microwave pulse matching is illustrated. A comparison of simulated and experimental HYSCORE (hyperfine sublevel correlation) spectra of ordered and disordered systems with varying complexity shows good qualitative agreement. (C) 2002 Elsevier Science (USA).

Entities:  

Year:  2002        PMID: 11846575     DOI: 10.1006/jmre.2001.2479

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  Mn2+-adenosine nucleotide complexes in the presence of the nitrogenase iron-protein: detection of conformational rearrangements directly at the nucleotide binding site by EPR and 2D-ESEEM (two-dimensional electron spin-echo envelope modulation spectroscopy).

Authors:  Jan Petersen; Christof Gessner; Karl Fisher; Claire J Mitchell; David J Lowe; Wolfgang Lubitz
Journal:  Biochem J       Date:  2005-11-01       Impact factor: 3.857

2.  Characterization of nonsymbiotic tomato hemoglobin.

Authors:  A Iulia Ioanitescu; Sylvia Dewilde; Laurent Kiger; Michael C Marden; Luc Moens; Sabine Van Doorslaer
Journal:  Biophys J       Date:  2005-07-22       Impact factor: 4.033

3.  Characterization of the MCRred2 form of methyl-coenzyme M reductase: a pulse EPR and ENDOR study.

Authors:  Cinzia Finazzo; Jeffrey Harmer; Bernhard Jaun; Evert C Duin; Felix Mahlert; Rudolf K Thauer; Sabine Van Doorslaer; Arthur Schweiger
Journal:  J Biol Inorg Chem       Date:  2003-03-06       Impact factor: 3.358

Review 4.  Advanced paramagnetic resonance spectroscopies of iron-sulfur proteins: Electron nuclear double resonance (ENDOR) and electron spin echo envelope modulation (ESEEM).

Authors:  George E Cutsail; Joshua Telser; Brian M Hoffman
Journal:  Biochim Biophys Acta       Date:  2015-02-14

5.  Analyzing heme proteins using EPR techniques: the heme-pocket structure of ferric mouse neuroglobin.

Authors:  E Vinck; S Van Doorslaer; S Dewilde; G Mitrikas; A Schweiger; L Moens
Journal:  J Biol Inorg Chem       Date:  2006-04-05       Impact factor: 3.358

6.  Structure and spin density of ferric low-spin heme complexes determined with high-resolution ESEEM experiments at 35 GHz.

Authors:  Inés García-Rubio; George Mitrikas
Journal:  J Biol Inorg Chem       Date:  2010-04-21       Impact factor: 3.358

7.  Facile C-H bond cleavage via a proton-coupled electron transfer involving a C-H...Cu(II) interaction.

Authors:  Xavi Ribas; Carlos Calle; Albert Poater; Alicia Casitas; Laura Gómez; Raül Xifra; Teodor Parella; Jordi Benet-Buchholz; Arthur Schweiger; George Mitrikas; Miquel Solà; Antoni Llobet; T Daniel P Stack
Journal:  J Am Chem Soc       Date:  2010-09-08       Impact factor: 15.419

8.  Coordination and binding geometry of methyl-coenzyme M in the red1m state of methyl-coenzyme M reductase.

Authors:  Dariush Hinderberger; Sieglinde Ebner; Stefan Mayr; Bernhard Jaun; Markus Reiher; Meike Goenrich; Rudolf K Thauer; Jeffrey Harmer
Journal:  J Biol Inorg Chem       Date:  2008-08-19       Impact factor: 3.358

9.  Structural analysis of Cu(II) ligation to the 5'-GMP nucleotide by pulse EPR spectroscopy.

Authors:  Maria Grazia Santangelo; Alfredo Medina-Molner; Arthur Schweiger; George Mitrikas; Bernhard Spingler
Journal:  J Biol Inorg Chem       Date:  2007-04-06       Impact factor: 3.358

10.  OPTESIM, a versatile toolbox for numerical simulation of electron spin echo envelope modulation (ESEEM) that features hybrid optimization and statistical assessment of parameters.

Authors:  Li Sun; Jessica Hernandez-Guzman; Kurt Warncke
Journal:  J Magn Reson       Date:  2009-05-29       Impact factor: 2.229

  10 in total

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