Literature DB >> 11842150

Oxygen deficiency responsive gene expression in Chlamydomonas reinhardtii through a copper-sensing signal transduction pathway.

Jeanette M Quinn1, Mats Eriksson, Jeffrey L Moseley, Sabeeha Merchant.   

Abstract

Chlamydomonas reinhardtii activates Cpx1, Cyc6, and Crd1, encoding, respectively, coproporphyrinogen oxidase, cytochrome c(6), and a novel di-iron enzyme when transferred to oxygen-deficient growth conditions. This response is physiologically relevant because C. reinhardtii experiences these growth conditions routinely, and furthermore, one of the target genes, Crd1, is functionally required for normal growth under oxygen-depleted conditions. The same genes are activated also in response to copper-deficiency through copper-response elements that function as target sites for a transcriptional activator. The core of the copper-response element, GTAC, is required also for the hypoxic response, as is a trans-acting locus, CRR1. Mercuric ions, which antagonize the copper-deficiency response, also antagonize the oxygen-deficiency response of these target genes. Taken together, these observations suggest that the oxygen- and copper-deficiency responses share signal transduction components. Nevertheless, whereas the copper-response element is sufficient for the nutritional copper response, the oxygen-deficiency response requires, in addition, a second cis-element, indicating that the response to oxygen depletion is not identical to the nutritional copper response. The distinction between the two responses is also supported by comparative analysis of the response of the target genes, Cyc6, Cpx1, and Crd1, to copper versus oxygen deficiency. A Crr1-independent pathway for Hyd1 expression in oxygen-depleted C. reinhardtii demonstrates the existence of multiple oxygen/redox-responsive circuits in this model organism.

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Year:  2002        PMID: 11842150      PMCID: PMC148909          DOI: 10.1104/pp.010694

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  44 in total

1.  Signal transduction. How do cells sense oxygen?

Authors:  H Zhu; H F Bunn
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

2.  Sustained photobiological hydrogen gas production upon reversible inactivation of oxygen evolution in the green alga Chlamydomonas reinhardtii.

Authors:  A Melis; L Zhang; M Forestier; M L Ghirardi; M Seibert
Journal:  Plant Physiol       Date:  2000-01       Impact factor: 8.340

3.  The anaerobic responsive element contains two GC-rich sequences essential for binding a nuclear protein and hypoxic activation of the maize Adh1 promoter.

Authors:  M R Olive; W J Peacock; E S Dennis
Journal:  Nucleic Acids Res       Date:  1991-12       Impact factor: 16.971

Review 4.  Mechanisms for redox control of gene expression.

Authors:  C E Bauer; S Elsen; T H Bird
Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

5.  Multiple pyruvate decarboxylase genes in maize are induced by hypoxia.

Authors:  V M Peschke; M M Sachs
Journal:  Mol Gen Genet       Date:  1993-08

6.  DNA sequences required for anaerobic expression of the maize alcohol dehydrogenase 1 gene.

Authors:  J C Walker; E A Howard; E S Dennis; W J Peacock
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

7.  The Crd1 gene encodes a putative di-iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii.

Authors:  J Moseley; J Quinn; M Eriksson; S Merchant
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

8.  Chlorophyll precursors are signals of chloroplast origin involved in light induction of nuclear heat-shock genes.

Authors:  J Kropat; U Oster; W Rüdiger; C F Beck
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

9.  Induction of coproporphyrinogen oxidase in Chlamydomonas chloroplasts occurs via transcriptional regulation of Cpx1 mediated by copper response elements and increased translation from a copper deficiency-specific form of the transcript.

Authors:  J M Quinn; S S Nakamoto; S Merchant
Journal:  J Biol Chem       Date:  1999-05-14       Impact factor: 5.157

10.  The genes required for heme synthesis in Salmonella typhimurium include those encoding alternative functions for aerobic and anaerobic coproporphyrinogen oxidation.

Authors:  K Xu; J Delling; T Elliott
Journal:  J Bacteriol       Date:  1992-06       Impact factor: 3.490

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  31 in total

1.  Differential expression of the Chlamydomonas [FeFe]-hydrogenase-encoding HYDA1 gene is regulated by the copper response regulator1.

Authors:  Miriam Pape; Camilla Lambertz; Thomas Happe; Anja Hemschemeier
Journal:  Plant Physiol       Date:  2012-06-05       Impact factor: 8.340

2.  Hypobaric biology: Arabidopsis gene expression at low atmospheric pressure.

Authors:  Anna-Lisa Paul; Andrew C Schuerger; Michael P Popp; Jeffrey T Richards; Michael S Manak; Robert J Ferl
Journal:  Plant Physiol       Date:  2003-12-30       Impact factor: 8.340

Review 3.  Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation.

Authors:  Sabeeha S Merchant; John D Helmann
Journal:  Adv Microb Physiol       Date:  2012       Impact factor: 3.517

4.  Analysis of light and CO(2) regulation in Chlamydomonas reinhardtii using genome-wide approaches.

Authors:  Chung-Soon Im; Zhaoduo Zhang; Jeffrey Shrager; Chiung-Wen Chang; Arthur R Grossman
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

5.  Systems biology approach in Chlamydomonas reveals connections between copper nutrition and multiple metabolic steps.

Authors:  Madeli Castruita; David Casero; Steven J Karpowicz; Janette Kropat; Astrid Vieler; Scott I Hsieh; Weihong Yan; Shawn Cokus; Joseph A Loo; Christoph Benning; Matteo Pellegrini; Sabeeha S Merchant
Journal:  Plant Cell       Date:  2011-04-15       Impact factor: 11.277

Review 6.  Chlamydomonas reinhardtii as a eukaryotic photosynthetic model for studies of heavy metal homeostasis and tolerance.

Authors:  M Hanikenne
Journal:  New Phytol       Date:  2003-08       Impact factor: 10.151

7.  Copper response regulator1-dependent and -independent responses of the Chlamydomonas reinhardtii transcriptome to dark anoxia.

Authors:  Anja Hemschemeier; David Casero; Bensheng Liu; Christoph Benning; Matteo Pellegrini; Thomas Happe; Sabeeha S Merchant
Journal:  Plant Cell       Date:  2013-09-06       Impact factor: 11.277

8.  Reciprocal expression of two candidate di-iron enzymes affecting photosystem I and light-harvesting complex accumulation.

Authors:  Jeffrey L Moseley; M Dudley Page; Nancy P Alder; Mats Eriksson; Jeanette Quinn; Feiris Soto; Steven M Theg; Michael Hippler; Sabeeha Merchant
Journal:  Plant Cell       Date:  2002-03       Impact factor: 11.277

9.  Copper response element and Crr1-dependent Ni(2+)-responsive promoter for induced, reversible gene expression in Chlamydomonas reinhardtii.

Authors:  Jeanette M Quinn; Janette Kropat; Sabeeha Merchant
Journal:  Eukaryot Cell       Date:  2003-10

10.  Potential for hydrogen production with inducible chloroplast gene expression in Chlamydomonas.

Authors:  Raymond Surzycki; Laurent Cournac; Gilles Peltier; Jean-David Rochaix
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-19       Impact factor: 11.205

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