Literature DB >> 11841271

A site-specific low-enrichment (15)N,(13)C isotope-labeling approach to unambiguous NMR spectral assignments in nucleic acids.

Anh Tuân Phan1, Dinshaw J Patel.   

Abstract

We demonstrate that base and sugar protons within a DNA oligomer can be assigned unambiguously following site-specific 15N,13C isotope incorporation at levels as low as 1% enrichment. This simple and cost-effective methodology is demonstrated on the d(GGGTTCAGG) DNA sequence, which forms a dimeric G-quadruplex containing G.G.G.G tetrads sandwiched between G.(C-A) triads.

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Year:  2002        PMID: 11841271     DOI: 10.1021/ja011977m

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  54 in total

1.  Two-repeat human telomeric d(TAGGGTTAGGGT) sequence forms interconverting parallel and antiparallel G-quadruplexes in solution: distinct topologies, thermodynamic properties, and folding/unfolding kinetics.

Authors:  Anh Tuân Phan; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2003-12-10       Impact factor: 15.419

2.  Two-repeat Tetrahymena telomeric d(TGGGGTTGGGGT) Sequence interconverts between asymmetric dimeric G-quadruplexes in solution.

Authors:  Anh Tuân Phan; Yasha S Modi; Dinshaw J Patel
Journal:  J Mol Biol       Date:  2004-04-16       Impact factor: 5.469

3.  Effects of site-specific guanine C8-modifications on an intramolecular DNA G-quadruplex.

Authors:  Christopher Jacques Lech; Joefina Kim Cheow Lim; Jocelyn Mei Wen Lim; Samir Amrane; Brahim Heddi; Anh Tuân Phan
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

4.  (3 + 1) Assembly of three human telomeric repeats into an asymmetric dimeric G-quadruplex.

Authors:  Na Zhang; Anh Tuân Phan; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2005-12-14       Impact factor: 15.419

5.  Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold.

Authors:  Kim Ngoc Luu; Anh Tuân Phan; Vitaly Kuryavyi; Laurent Lacroix; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2006-08-02       Impact factor: 15.419

6.  An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution.

Authors:  Jixun Dai; Thomas S Dexheimer; Ding Chen; Megan Carver; Attila Ambrus; Roger A Jones; Danzhou Yang
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

7.  Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter.

Authors:  Anh Tuân Phan; Vitaly Kuryavyi; Sarah Burge; Stephen Neidle; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2007-03-16       Impact factor: 15.419

8.  Expression of the human telomerase reverse transcriptase gene is modulated by quadruplex formation in its first exon due to DNA methylation.

Authors:  Pei-Tzu Li; Zi-Fu Wang; I-Te Chu; Yen-Min Kuan; Ming-Hao Li; Mu-Ching Huang; Pei-Chi Chiang; Ta-Chau Chang; Chin-Tin Chen
Journal:  J Biol Chem       Date:  2017-10-30       Impact factor: 5.157

9.  Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter.

Authors:  Anh Tuân Phan; Yasha S Modi; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2004-07-21       Impact factor: 15.419

10.  Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G.C.G.C tetrad.

Authors:  Kah Wai Lim; Patrizia Alberti; Aurore Guédin; Laurent Lacroix; Jean-François Riou; Nicola J Royle; Jean-Louis Mergny; Anh Tuân Phan
Journal:  Nucleic Acids Res       Date:  2009-08-19       Impact factor: 16.971

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