Literature DB >> 11839488

Kinetic studies of protein-protein interactions.

Gideon Schreiber1.   

Abstract

The structure of a protein-protein interaction, its affinity and thermodynamic characteristics depict a 'frozen' state of a complex. This picture ignores the kinetic nature of complex formation and dissociation, which are of major biological and biophysical interest. This review highlights recent advances in deciphering the kinetic pathway of protein-protein complexation, the nature of the encounter complex, transition state and intermediate along the reaction, and the effects of mutation, viscosity, pH and salt on association.

Mesh:

Year:  2002        PMID: 11839488     DOI: 10.1016/s0959-440x(02)00287-7

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  113 in total

1.  A perspective on mechanisms of protein tetramer formation.

Authors:  Evan T Powers; David L Powers
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Biochemical characterization of the Ran-RanBP1-RanGAP system: are RanBP proteins and the acidic tail of RanGAP required for the Ran-RanGAP GTPase reaction?

Authors:  Michael J Seewald; Astrid Kraemer; Marian Farkasovsky; Carolin Körner; Alfred Wittinghofer; Ingrid R Vetter
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

3.  Electrostatically optimized Ras-binding Ral guanine dissociation stimulator mutants increase the rate of association by stabilizing the encounter complex.

Authors:  C Kiel; T Selzer; Y Shaul; G Schreiber; C Herrmann
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-14       Impact factor: 11.205

Review 4.  How do site-specific DNA-binding proteins find their targets?

Authors:  Stephen E Halford; John F Marko
Journal:  Nucleic Acids Res       Date:  2004-06-03       Impact factor: 16.971

5.  A Brownian dynamics study: the effect of a membrane environment on an electron transfer system.

Authors:  Dagmar Flöck; Volkhard Helms
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

6.  Rational design of solution additives for the prevention of protein aggregation.

Authors:  Brian M Baynes; Bernhardt L Trout
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

7.  Protein thermal aggregation involves distinct regions: sequential events in the heat-induced unfolding and aggregation of hemoglobin.

Authors:  Yong-Bin Yan; Qi Wang; Hua-Wei He; Hai-Meng Zhou
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

8.  A new hydrogen-bonding potential for the design of protein-RNA interactions predicts specific contacts and discriminates decoys.

Authors:  Yu Chen; Tanja Kortemme; Tim Robertson; David Baker; Gabriele Varani
Journal:  Nucleic Acids Res       Date:  2004-09-30       Impact factor: 16.971

9.  Transiently populated intermediate functions as a branching point of the FF domain folding pathway.

Authors:  Dmitry M Korzhnev; Tomasz L Religa; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-30       Impact factor: 11.205

10.  Modeling binding kinetics at the Q(A) site in bacterial reaction centers.

Authors:  Jennifer Madeo; M R Gunner
Journal:  Biochemistry       Date:  2005-08-23       Impact factor: 3.162

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