Literature DB >> 11839183

RNA interference: advances and questions.

Elisabetta Ullu1, Appolinaire Djikeng, Huafang Shi, Christian Tschudi.   

Abstract

In animals and protozoa gene-specific double-stranded RNA triggers the degradation of homologous cellular RNAs, the phenomenon of RNA interference (RNAi). RNAi has been shown to represent a novel paradigm in eukaryotic biology and a powerful method for studying gene function. Here we discuss RNAi in terms of its mechanism, its relationship to other post-transcriptional gene silencing phenomena in plants and fungi, its connection to retroposon silencing and possibly to translation, and its biological role. Among the organisms where RNAi has been demonstrated the protozoan parasite Trypanosoma brucei represents the most ancient branch of the eukaryotic lineage. We provide a synopsis of what is currently known about RNAi in T. brucei and outline the recent advances that make RNAi the method of choice to disrupt gene function in these organisms.

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Year:  2002        PMID: 11839183      PMCID: PMC1692925          DOI: 10.1098/rstb.2001.0952

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  41 in total

1.  Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference.

Authors:  S Parrish; J Fleenor; S Xu; C Mello; A Fire
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

2.  Genetic interference in Trypanosoma brucei by heritable and inducible double-stranded RNA.

Authors:  H Shi; A Djikeng; T Mark; E Wirtz; C Tschudi; E Ullu
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

3.  A link between RNA interference and nonsense-mediated decay in Caenorhabditis elegans.

Authors:  M E Domeier; D P Morse; S W Knight; M Portereiko; B L Bass; S E Mango
Journal:  Science       Date:  2000-09-15       Impact factor: 47.728

4.  RNAi in C. elegans: soaking in the genome sequence.

Authors:  H Tabara; A Grishok; C C Mello
Journal:  Science       Date:  1998-10-16       Impact factor: 47.728

Review 5.  RNAi and double-strand RNA.

Authors:  P A Sharp
Journal:  Genes Dev       Date:  1999-01-15       Impact factor: 11.361

6.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

7.  RNAi analysis of genes expressed in the ovary of Caenorhabditis elegans.

Authors:  F Piano; A J Schetter; M Mangone; L Stein; K J Kemphues
Journal:  Curr Biol       Date:  2000 Dec 14-28       Impact factor: 10.834

8.  Double-stranded RNA-specific adenosine deaminase: nucleic acid binding properties.

Authors:  Y Liu; A Herbert; A Rich; C E Samuel
Journal:  Methods       Date:  1998-07       Impact factor: 3.608

9.  Double-stranded RNA interference in Trypanosoma brucei using head-to-head promoters.

Authors:  D J LaCount; S Bruse; K L Hill; J E Donelson
Journal:  Mol Biochem Parasitol       Date:  2000-11       Impact factor: 1.759

10.  Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase.

Authors:  C Cogoni; G Macino
Journal:  Science       Date:  1999-12-17       Impact factor: 47.728

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  17 in total

Review 1.  Biology and mechanism of trypanosome cell motility.

Authors:  Kent L Hill
Journal:  Eukaryot Cell       Date:  2003-04

2.  RNA interference in Trypanosoma brucei: role of the n-terminal RGG domain and the polyribosome association of argonaute.

Authors:  Huafang Shi; Nathalie Chamond; Appolinaire Djikeng; Christian Tschudi; Elisabetta Ullu
Journal:  J Biol Chem       Date:  2009-10-30       Impact factor: 5.157

3.  Characterization and developmentally regulated localization of the mitochondrial carrier protein homologue MCP6 from Trypanosoma brucei.

Authors:  Claudia Colasante; Vincent P Alibu; Simon Kirchberger; Joachim Tjaden; Christine Clayton; Frank Voncken
Journal:  Eukaryot Cell       Date:  2006-08

4.  Gene clusters for insecticidal loline alkaloids in the grass-endophytic fungus Neotyphodium uncinatum.

Authors:  Martin J Spiering; Christina D Moon; Heather H Wilkinson; Christopher L Schardl
Journal:  Genetics       Date:  2005-01-16       Impact factor: 4.562

5.  RNA-induced silencing attenuates G protein-mediated calcium signals.

Authors:  Finly Philip; Shriya Sahu; Urszula Golebiewska; Suzanne Scarlata
Journal:  FASEB J       Date:  2016-02-09       Impact factor: 5.191

6.  Approaches for functional analysis of flagellar proteins in African trypanosomes.

Authors:  Michael Oberholzer; Miguel A Lopez; Katherine S Ralston; Kent L Hill
Journal:  Methods Cell Biol       Date:  2009-12-04       Impact factor: 1.441

7.  Adaptor protein 2 regulates receptor-mediated endocytosis and cyst formation in Giardia lamblia.

Authors:  Maria R Rivero; Cecilia V Vranych; Mariano Bisbal; Belkys A Maletto; Andrea S Ropolo; Maria C Touz
Journal:  Biochem J       Date:  2010-04-28       Impact factor: 3.857

8.  ATP synthase is responsible for maintaining mitochondrial membrane potential in bloodstream form Trypanosoma brucei.

Authors:  Silvia V Brown; Paul Hosking; Jinlei Li; Noreen Williams
Journal:  Eukaryot Cell       Date:  2006-01

9.  A divergent transcription factor TFIIB in trypanosomes is required for RNA polymerase II-dependent spliced leader RNA transcription and cell viability.

Authors:  Jennifer B Palenchar; Wenzhe Liu; Peter M Palenchar; Vivian Bellofatto
Journal:  Eukaryot Cell       Date:  2006-02

10.  Disruption of Ixodes scapularis anticoagulation by using RNA interference.

Authors:  Sukanya Narasimhan; Ruth R Montgomery; Kathleen DePonte; Christian Tschudi; Nancy Marcantonio; John F Anderson; John R Sauer; Michael Cappello; Fred S Kantor; Erol Fikrig
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-26       Impact factor: 11.205

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