Literature DB >> 11827534

Enzymatic reaction of hydrogen peroxide-dependent peroxygenase cytochrome P450s: kinetic deuterium isotope effects and analyses by resonance Raman spectroscopy.

Isamu Matsunaga1, Akari Yamada, Dong-Sun Lee, Eiji Obayashi, Nagatoshi Fujiwara, Kazuo Kobayashi, Hisashi Ogura, Yoshitsugu Shiro.   

Abstract

Cytochromes P450SP(alpha) (CYP152B1) and P450BS(beta) (CYP152A1), which are isolated from Sphingomonas paucimobilis and Bacillus subtilis, respectively, belong to the P450 superfamily, but catalyze hydroxylation reactions, in which an oxygen atom from H2O2 is efficiently introduced into fatty acids (e.g., myristic acid). P450SP(alpha) produces the alpha-hydroxylated (alpha-OH) products at 100%, while P450BS(beta) produces alpha- and beta-hydroxylated (beta-OH) products at 33 and 67%, respectively. Using deuterium-substituted fatty acids ([2,2-d2]-myristic acid and d27-myristic acid) as a substrate, the peroxygenase reactions of the two bacterial P450s were investigated. In the P450SP(alpha) reaction, we observed an intermolecular noncompetitive kinetic isotope effect on Vmax (DV = 4.1) when [2,2-d2]-myristic acid was used, suggesting that an isotopically sensitive step involving the alpha-hydrogen of the fatty acid is present in the catalytic cycle. On the other hand, D(V/K) was masked, in sharp contrast to the features of usual monooxygenases P450. The characteristic kinetic features can be interpreted in terms of the faster product formation than the substrate dissociation. A similar kinetic isotope effect was observed [DV = 4.9, D(V/K) approximately 1] for the P450BS(beta) reaction, when d27-myristic acid was used as a substrate, indicating that the reaction mechanism is the same for both peroxygenases. The resonance Raman spectral data of P450BS(beta) in the ferric and ferrous-CO forms in the presence and absence of myristic acid demonstrated that the catalytic pocket of the enzyme is polar, so that the location of the carboxylate of the substrate close to the sixth ligand of the heme could be allowed. On the basis of these results on the kinetic isotope effects and spectroscopy, we discuss the possible mechanisms of the alpha- and beta-hydroxylation of fatty acids catalyzed by peroxygenases P450SP(alpha) and P450BS(beta).

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Year:  2002        PMID: 11827534     DOI: 10.1021/bi011883p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

Review 1.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

Review 2.  Peroxygenase reactions catalyzed by cytochromes P450.

Authors:  Osami Shoji; Yoshihito Watanabe
Journal:  J Biol Inorg Chem       Date:  2014-02-06       Impact factor: 3.358

Review 3.  Divergent mechanisms of iron-containing enzymes for hydrocarbon biosynthesis.

Authors:  Courtney E Wise; Job L Grant; Jose A Amaya; Steven C Ratigan; Chun H Hsieh; Olivia M Manley; Thomas M Makris
Journal:  J Biol Inorg Chem       Date:  2016-12-21       Impact factor: 3.358

4.  Catalytic strategy for carbon-carbon bond scission by the cytochrome P450 OleT.

Authors:  Job L Grant; Megan E Mitchell; Thomas Michael Makris
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-23       Impact factor: 11.205

5.  The Enigmatic P450 Decarboxylase OleT Is Capable of, but Evolved To Frustrate, Oxygen Rebound Chemistry.

Authors:  Chun H Hsieh; Xiongyi Huang; José A Amaya; Cooper D Rutland; Carson L Keys; John T Groves; Rachel N Austin; Thomas M Makris
Journal:  Biochemistry       Date:  2017-06-26       Impact factor: 3.162

6.  Cytochrome P450 102A2 Catalyzes Efficient Oxidation of Sodium Dodecyl Sulphate: A Molecular Tool for Remediation.

Authors:  Irene Axarli; Ariadne Prigipaki; Nikolaos E Labrou
Journal:  Enzyme Res       Date:  2010-07-01

Review 7.  Hydrocarbon hydroxylation by cytochrome P450 enzymes.

Authors:  Paul R Ortiz de Montellano
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

8.  Protein oxidation mediated by heme-induced active site conversion specific for heme-regulated transcription factor, iron response regulator.

Authors:  Chihiro Kitatsuji; Kozue Izumi; Shusuke Nambu; Masaki Kurogochi; Takeshi Uchida; Shin-ichiro Nishimura; Kazuhiro Iwai; Mark R O'Brian; Masao Ikeda-Saito; Koichiro Ishimori
Journal:  Sci Rep       Date:  2016-01-05       Impact factor: 4.379

9.  Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.

Authors:  Sarah Matthews; James D Belcher; Kang Lan Tee; Hazel M Girvan; Kirsty J McLean; Stephen E J Rigby; Colin W Levy; David Leys; David A Parker; Richard T Blankley; Andrew W Munro
Journal:  J Biol Chem       Date:  2017-01-04       Impact factor: 5.157

10.  Structure and biochemical properties of the alkene producing cytochrome P450 OleTJE (CYP152L1) from the Jeotgalicoccus sp. 8456 bacterium.

Authors:  James Belcher; Kirsty J McLean; Sarah Matthews; Laura S Woodward; Karl Fisher; Stephen E J Rigby; David R Nelson; Donna Potts; Michael T Baynham; David A Parker; David Leys; Andrew W Munro
Journal:  J Biol Chem       Date:  2014-01-18       Impact factor: 5.157

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